CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032229.1-P	Field mustard	nucleus	99.64	100.0
CDY10616	Canola	cytosol, nucleus, peroxisome	89.29	99.6
CDY25677	Canola	nucleus	93.21	97.03
AT1G47740.3	Thale cress	nucleus	92.14	92.47
CDY17002	Canola	nucleus	87.14	86.83
CDY17812	Canola	nucleus	87.14	86.83
VIT_18s0001g12090.t01	Wine grape	mitochondrion	63.93	72.47
KRH05795	Soybean	mitochondrion	63.57	70.92
Solyc12g089060.1.1	Tomato	mitochondrion	62.5	70.85
PGSC0003DMT400039949	Potato	mitochondrion	62.14	70.45
KRH15239	Soybean	mitochondrion	62.86	70.12
GSMUA_Achr7P25980_001	Banana	mitochondrion	50.71	68.27
KRH49521	Soybean	mitochondrion	58.93	65.74
KRG89196	Soybean	mitochondrion	58.57	65.34
Solyc04g080030.2.1	Tomato	mitochondrion	56.07	64.61
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	52.86	64.35
KRH38144	Soybean	mitochondrion	48.93	63.72
Zm00001d028130_P001	Maize	mitochondrion	56.07	62.8
PGSC0003DMT400064873	Potato	nucleus	55.71	62.65
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	55.36	62.25
Os03t0198500-01	Rice	mitochondrion	54.64	61.94
EER95329	Sorghum	mitochondrion	55.71	61.9
TraesCS4A01G040500.1	Wheat	mitochondrion	54.64	61.69
TraesCS4B01G261700.1	Wheat	mitochondrion	54.29	61.29
TraesCS4D01G261500.1	Wheat	mitochondrion	54.29	61.29
Zm00001d048173_P001	Maize	mitochondrion	55.36	61.26
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	55.36	60.08
KXG39054	Sorghum	plastid	52.5	59.27
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	34.64	58.79
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	53.57	57.69
PGSC0003DMT400071605	Potato	mitochondrion	58.57	57.54
VIT_03s0063g02130.t01	Wine grape	mitochondrion	58.57	48.96
CDY05475	Canola	mitochondrion	37.5	48.61
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	56.79	48.18
CDY07077	Canola	cytosol, mitochondrion	37.5	47.73
CDY05376	Canola	cytosol, mitochondrion	36.79	47.69
CDY65538	Canola	cytosol, mitochondrion	37.14	47.27
CDY65539	Canola	cytosol, mitochondrion	37.14	47.27
CDX88162	Canola	cytosol, mitochondrion	37.14	47.27
CDX90471	Canola	cytosol	34.64	45.33
CDY39951	Canola	cytosol	36.43	44.74
CDY09624	Canola	cytosol	34.29	44.65
CDX67961	Canola	cytosol	35.71	43.86
CDX79359	Canola	cytosol	35.71	43.86
CDX87334	Canola	cytosol	36.07	43.53
CDY27921	Canola	cytosol	33.57	42.34
CDX76571	Canola	cytosol	33.93	42.04
CDX76766	Canola	nucleus	35.36	41.95
CDX77757	Canola	cytosol	34.64	39.92
CDY35370	Canola	nucleus, plasma membrane	35.0	39.84
CDY64684	Canola	cytosol	34.29	39.51
CDY62507	Canola	nucleus, plasma membrane	33.93	39.42
CDX75209	Canola	nucleus	32.14	39.13
CDX68806	Canola	nucleus	33.57	30.32
CDY49480	Canola	cytosol	18.93	20.95
CDY66007	Canola	cytosol	18.93	20.87
CDX94426	Canola	cytosol	18.21	20.24
CDX89402	Canola	cytosol	17.86	19.92
CDX89404	Canola	cytosol	17.14	19.59
CDX94429	Canola	cytosol	17.14	19.59
CDY56277	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	35.0	17.88

Protein Annotations

EnsemblPlants:CDY23657	EnsemblPlantsGene:GSBRNA2T00023904001	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	KEGG:00261+3.4.-.-	KEGG:00310+3.4.-.-
KEGG:00550+3.4.-.-	KEGG:00780+3.4.-.-	MEROPS:C97.A09	PANTHER:PTHR12378	PANTHER:PTHR12378:SF11	PFAM:PF05903
ProteinID:CDY23657	ProteinID:CDY23657.1	SEG:seg	SMART:SM01179	UniParc:UPI0004EE1504	UniProt:A0A078GEY0
MapMan:19.4.1.7	:	:	:	:	:

Description

BnaA05g17720DBnaA05g17720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEY0]

Coordinates

chrLK032146:-:173068..175453

Molecular Weight (calculated)

31697.2 Da

IEP (calculated)

9.222

GRAVY (calculated)

-0.415

Length

280 amino acids

Sequence
(BLAST)

001: MLKGEAEPKQ KRAGWSESLL EFRSGLGEKM KTEPKKRWKS LEPLHLKSKS VARFCFFSKI KSNNYGPGRA PVYLNVYDLT PINGYIYWAG LGIFHSGVEV
101: HGVEYAFGAH DYANSGVFEV EPRQCPGFKF KKSIFIGTTN LNPGQVREFM ENMACSYYGN MYHLIVKNCN HFCQDACYKL TGKKIPKWVN RLVEIGSVCS
201: CILPESLKIT AVCHDPDEQI PEEENEKRSL TSSFSCLSSI SMRQKQLSTS SLFLQSPLRG CLPPFQLKRS KSNSSSLKEM

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.