CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05795	Soybean	mitochondrion	97.61	97.61
VIT_18s0001g12090.t01	Wine grape	mitochondrion	82.47	83.81
KRH38144	Soybean	mitochondrion	70.92	82.79
Solyc12g089060.1.1	Tomato	mitochondrion	75.7	76.92
PGSC0003DMT400039949	Potato	mitochondrion	75.3	76.52
Solyc04g080030.2.1	Tomato	mitochondrion	70.12	72.43
KRH49521	Soybean	mitochondrion	72.11	72.11
KRG89196	Soybean	mitochondrion	71.71	71.71
GSMUA_Achr7P25980_001	Banana	mitochondrion	59.36	71.63
Zm00001d028130_P001	Maize	mitochondrion	70.12	70.4
CDY10616	Canola	cytosol, nucleus, peroxisome	70.12	70.12
TraesCS4A01G040500.1	Wheat	mitochondrion	68.92	69.76
Os03t0198500-01	Rice	mitochondrion	68.53	69.64
TraesCS4D01G261500.1	Wheat	mitochondrion	68.53	69.35
TraesCS4B01G261700.1	Wheat	mitochondrion	68.53	69.35
EER95329	Sorghum	mitochondrion	69.32	69.05
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	62.95	68.7
Zm00001d048173_P001	Maize	mitochondrion	68.92	68.38
AT1G47740.3	Thale cress	nucleus	72.11	64.87
PGSC0003DMT400071605	Potato	mitochondrion	73.31	64.56
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	65.34	63.57
CDY25677	Canola	nucleus	67.73	63.2
Bra032229.1-P	Field mustard	nucleus	70.12	63.08
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	41.43	63.03
CDY23657	Canola	nucleus	70.12	62.86
CDY17002	Canola	nucleus	69.72	62.28
KXG39054	Sorghum	plastid	61.35	62.1
Bra014091.1-P	Field mustard	nucleus	69.32	61.92
CDY17812	Canola	nucleus	69.32	61.92
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	60.96	58.85
KRH05264	Soybean	cytosol, mitochondrion	46.61	54.17
KRH15787	Soybean	mitochondrion	46.22	53.95
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	69.72	53.03
KRH52364	Soybean	mitochondrion	44.22	49.55
KRH61696	Soybean	cytosol	42.63	49.31
KRH03735	Soybean	nucleus	41.43	46.22
KRH57475	Soybean	cytosol	41.04	46.19
KRH44526	Soybean	mitochondrion	39.84	46.08
KRH77327	Soybean	cytosol	41.04	45.98
KRH28159	Soybean	cytosol	41.04	45.98
KRH47381	Soybean	cytosol	39.84	45.66
KRH04183	Soybean	cytosol	40.24	45.29
KRH63012	Soybean	nucleus	39.84	43.48
KRH54877	Soybean	cytosol, peroxisome	31.87	42.33
KRH35244	Soybean	cytosol, peroxisome, plastid	23.51	24.58
KRH08874	Soybean	cytosol	21.51	22.04
KRH38387	Soybean	cytosol	21.12	21.37

Protein Annotations

EntrezGene:100804405	MapMan:19.4.1.7	Gene3D:3.90.1720.30	EMBL:ACUP02008569	EMBL:BT099037	UniProt:C6TMS7
MEROPS:C97.A09	EnsemblPlantsGene:GLYMA_14G076500	ProteinID:KRH15235.1	ProteinID:KRH15236.1	ProteinID:KRH15237.1	ProteinID:KRH15238.1
EnsemblPlants:KRH15239	ProteinID:KRH15239	ProteinID:KRH15239.1	ProteinID:KRH15240.1	ProteinID:KRH15241.1	ProteinID:KRH15242.1
ProteinID:KRH15243.1	ProteinID:KRH15244.1	ProteinID:KRH15245.1	ProteinID:KRH15246.1	PFAM:PF05903	InterPro:PPPDE_dom
PANTHER:PTHR12378	PANTHER:PTHR12378:SF37	SMART:SM01179	UniParc:UPI0001B172BF	:	:

Description

hypothetical protein

Coordinates

chr14:-:6411494..6420686

Molecular Weight (calculated)

28421.3 Da

IEP (calculated)

10.241

GRAVY (calculated)

-0.398

Length

251 amino acids

Sequence
(BLAST)

001: MKLKSKKGWK SIVPLHLKGK SASRFSLFRK VNSAGYGPGK TPVYLNVYDL TPMNGYVYWA GLGIYHSGVE VHGVEYAFGA HDYPTSGVFE VEPRQCPGFK
101: FRKSIFIGIT SLDSTQVREF MERQSARYNG DTYHLIVKNC NHFCKDICYK LTGKSIPTWV NRLARLGSIC NCILPEALRI SAVAHDPNYQ PHDSEKRRLR
201: SGFNCLSSIS MRQKHLSTSS LFLQSPIRGC LSSSWPSSEL RKSINRSLKE R

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.