Factsheet for GSMUA_Achr7P25980_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
peroxisome 1
plastid 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	85.1	76.96
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	53.85	67.88
VIT_18s0001g12090.t01	Wine grape	mitochondrion	73.08	61.54
KRG89196	Soybean	mitochondrion	74.04	61.35
KRH49521	Soybean	mitochondrion	73.08	60.56
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	74.52	60.08
KRH38144	Soybean	mitochondrion	62.02	60.0
KRH05795	Soybean	mitochondrion	72.12	59.76
KRH15239	Soybean	mitochondrion	71.63	59.36
Zm00001d028130_P001	Maize	mitochondrion	69.71	58.0
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	69.23	57.83
PGSC0003DMT400064873	Potato	nucleus	69.23	57.83
EER95329	Sorghum	mitochondrion	69.71	57.54
Os03t0198500-01	Rice	mitochondrion	68.27	57.49
Zm00001d048173_P001	Maize	mitochondrion	69.71	57.31
CDY10616	Canola	cytosol, nucleus, peroxisome	68.27	56.57
TraesCS4D01G261500.1	Wheat	mitochondrion	66.83	56.05
TraesCS4B01G261700.1	Wheat	mitochondrion	66.83	56.05
TraesCS4A01G040500.1	Wheat	mitochondrion	66.83	56.05
Solyc12g089060.1.1	Tomato	mitochondrion	66.35	55.87
PGSC0003DMT400039949	Potato	mitochondrion	66.35	55.87
Solyc04g080030.2.1	Tomato	mitochondrion	62.5	53.5
CDY25677	Canola	nucleus	67.31	52.04
AT1G47740.3	Thale cress	nucleus	69.71	51.97
Bra032229.1-P	Field mustard	nucleus	68.27	50.9
CDY23657	Canola	nucleus	68.27	50.71
Bra014091.1-P	Field mustard	nucleus	67.79	50.18
CDY17002	Canola	nucleus	67.31	49.82
CDY17812	Canola	nucleus	67.31	49.82
PGSC0003DMT400071605	Potato	mitochondrion	65.38	47.72
GSMUA_Achr3P04560_001	Banana	mitochondrion	50.96	46.7
GSMUA_Achr4P01900_001	Banana	mitochondrion	50.0	46.02
VIT_03s0063g02130.t01	Wine grape	mitochondrion	72.12	44.78
GSMUA_AchrUn_...	Banana	cytosol	46.15	44.65
GSMUA_Achr4P30040_001	Banana	mitochondrion	47.12	43.75
GSMUA_Achr5P06500_001	Banana	cytosol, extracellular, peroxisome	45.19	43.72
GSMUA_Achr2P19400_001	Banana	plastid	44.71	42.86
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	67.31	42.42
GSMUA_Achr1P00440_001	Banana	mitochondrion	46.15	35.04
GSMUA_Achr11P...	Banana	mitochondrion	50.0	32.81
GSMUA_Achr5P12520_001	Banana	plastid	45.67	26.03
GSMUA_Achr11P...	Banana	cytosol	21.15	21.57
GSMUA_AchrUn_...	Banana	cytosol	25.48	21.37
GSMUA_Achr11P...	Banana	cytosol	24.52	20.65
GSMUA_Achr8P12230_001	Banana	cytosol	24.04	20.33

Protein Annotations

EnsemblPlants:GSMUA_Achr7P25980_001	EnsemblPlants:GSMUA_Achr7T25980_001	EnsemblPlantsGene:GSMUA_Achr7G25980_001	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378
PANTHER:PTHR12378:SF4	PFAM:PF05903	SMART:SM01179	UniParc:UPI000295568C	UniProt:M0TKT4	MapMan:19.4.1.7

Description

ethylene-responsive element-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G25980_001]

Coordinates

chr7:+:27436146..27440673

Molecular Weight (calculated)

23401.0 Da

IEP (calculated)

8.737

GRAVY (calculated)

-0.177

Length

208 amino acids

Sequence
(BLAST)

001: MFSKVRSASR TSGNAPVYLN VYDLTPINGY MYWAGLGIFH TGVEVHGVEY AFGAHDYPTS GVFEVEPHQC PGFRFRKSIF MGTTCLDPFQ VREFMEIQSV
101: NYNGDTYHLI TKNCNHFCQD ICFNLTGNSI PKWVNRLARI GSLCNCLLPE ALKITAVQHD PVPQTKDGER RKLRSAFSCL SSISMRQKRF SAASLLSPPF
201: RSAFHIGS

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.