CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028130_P001	Maize	mitochondrion	97.22	98.0
Zm00001d048173_P001	Maize	mitochondrion	96.83	96.44
Os03t0198500-01	Rice	mitochondrion	89.29	91.09
TraesCS4D01G261500.1	Wheat	mitochondrion	88.89	90.32
TraesCS4B01G261700.1	Wheat	mitochondrion	88.49	89.92
TraesCS4A01G040500.1	Wheat	mitochondrion	88.49	89.92
VIT_18s0001g12090.t01	Wine grape	mitochondrion	71.83	73.28
GSMUA_Achr7P25980_001	Banana	mitochondrion	57.54	69.71
KRH05795	Soybean	mitochondrion	69.05	69.32
KRH15239	Soybean	mitochondrion	69.05	69.32
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	63.1	69.13
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	90.08	68.79
KRH38144	Soybean	mitochondrion	56.75	66.51
PGSC0003DMT400039949	Potato	mitochondrion	65.08	66.4
Solyc12g089060.1.1	Tomato	mitochondrion	64.68	65.99
KRG89196	Soybean	mitochondrion	65.08	65.34
KRH49521	Soybean	mitochondrion	65.08	65.34
Solyc04g080030.2.1	Tomato	mitochondrion	61.51	63.79
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	65.08	63.57
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	62.3	63.05
PGSC0003DMT400064873	Potato	nucleus	62.3	63.05
KXG39054	Sorghum	plastid	61.51	62.5
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	40.87	62.42
CDY10616	Canola	cytosol, nucleus, peroxisome	61.9	62.15
AT1G47740.3	Thale cress	nucleus	63.49	57.35
CDY17002	Canola	nucleus	63.89	57.3
Bra014091.1-P	Field mustard	nucleus	63.49	56.94
CDY17812	Canola	nucleus	63.49	56.94
PGSC0003DMT400071605	Potato	mitochondrion	64.29	56.84
CDY25677	Canola	nucleus	60.32	56.51
Bra032229.1-P	Field mustard	nucleus	61.9	55.91
CDY23657	Canola	nucleus	61.9	55.71
EES11216	Sorghum	cytosol	40.48	49.04
VIT_03s0063g02130.t01	Wine grape	mitochondrion	63.49	47.76
EES07522	Sorghum	cytosol	38.1	45.93
EER89945	Sorghum	cytosol	37.7	45.02
EER95706	Sorghum	mitochondrion	37.7	40.6
KXG19474	Sorghum	plastid	34.52	33.21
EER94588	Sorghum	cytosol	22.22	22.86
EER87703	Sorghum	cytosol	24.21	22.76

Protein Annotations

EnsemblPlants:EER95329	EnsemblPlantsGene:SORBI_3001G468500	EntrezGene:8081883	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378
PANTHER:PTHR12378:SF11	PFAM:PF05903	ProteinID:EER95329	ProteinID:EER95329.1	RefSeq:XP_002468331.1	SEG:seg
SMART:SM01179	UniParc:UPI0001A82D9D	UniProt:C5WTV7	MapMan:19.4.1.7	:	:

Description

hypothetical protein

Coordinates

chr1:-:74139129..74144156

Molecular Weight (calculated)

28521.3 Da

IEP (calculated)

9.840

GRAVY (calculated)

-0.448

Length

252 amino acids

Sequence
(BLAST)

001: MKLRTKRPEW KSLMPLQLSR LSRKSAMRFF LFPKVQSAGQ SPDDTPVYLN VYDLTPMNGY IYWAGLGIFH SGIEVHGVEY AFGAHDFPTS GVFEVEPRQC
101: PGFRFRKSIF LGTTCLDPIQ VRQFMELQSV NYNGDTYHLI TKNCNHFCKD MCYKLTGNKI PKWVNRLARI GAICNCLLPE SLKISPVGHD PNSQSEDSEK
201: RRLRNPFSCF SSISSHRQLP SSSPFPPSPV KEGLPHCSSR KPSTGAASLK NR

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.