Factsheet for Bra014091.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17002	Canola	nucleus	99.29	99.29
AT1G47740.3	Thale cress	nucleus	90.39	91.04
Bra032229.1-P	Field mustard	nucleus	87.19	87.81
VIT_18s0001g12090.t01	Wine grape	mitochondrion	63.7	72.47
KRH05795	Soybean	mitochondrion	62.28	69.72
Solyc12g089060.1.1	Tomato	mitochondrion	61.21	69.64
KRH15239	Soybean	mitochondrion	61.92	69.32
PGSC0003DMT400039949	Potato	mitochondrion	60.85	69.23
GSMUA_Achr7P25980_001	Banana	mitochondrion	50.18	67.79
KRH49521	Soybean	mitochondrion	58.72	65.74
KRG89196	Soybean	mitochondrion	58.72	65.74
Solyc04g080030.2.1	Tomato	mitochondrion	55.87	64.61
Zm00001d028130_P001	Maize	mitochondrion	57.3	64.4
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	52.67	64.35
EER95329	Sorghum	mitochondrion	56.94	63.49
TraesCS4A01G040500.1	Wheat	mitochondrion	55.87	63.31
KRH38144	Soybean	mitochondrion	48.4	63.26
TraesCS4D01G261500.1	Wheat	mitochondrion	55.52	62.9
TraesCS4B01G261700.1	Wheat	mitochondrion	55.52	62.9
Zm00001d048173_P001	Maize	mitochondrion	56.58	62.85
Os03t0198500-01	Rice	mitochondrion	54.8	62.35
PGSC0003DMT400064873	Potato	nucleus	55.16	62.25
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	54.8	61.85
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	55.87	60.85
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	35.59	60.61
KXG39054	Sorghum	plastid	53.02	60.08
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	54.45	58.85
PGSC0003DMT400071605	Potato	mitochondrion	58.36	57.54
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	57.65	49.09
Bra020487.1-P	Field mustard	mitochondrion	37.72	49.07
VIT_03s0063g02130.t01	Wine grape	mitochondrion	57.65	48.36
Bra009823.1-P	Field mustard	cytosol, mitochondrion	37.72	48.18
Bra012661.1-P	Field mustard	cytosol	34.88	45.79
Bra035161.1-P	Field mustard	cytosol	35.94	44.3
Bra003580.1-P	Field mustard	cytosol	35.59	43.86
Bra024951.1-P	Field mustard	cytosol	35.94	41.56
Bra032034.1-P	Field mustard	nucleus, plasma membrane	34.88	39.36
Bra011312.1-P	Field mustard	nucleus	32.03	39.13
Bra010452.1-P	Field mustard	cytosol	19.57	21.65
Bra013910.1-P	Field mustard	cytosol	19.22	21.51
Bra013908.1-P	Field mustard	cytosol	18.51	21.22
Bra007813.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	34.88	17.88

Protein Annotations

EnsemblPlants:Bra014091.1	EnsemblPlants:Bra014091.1-P	EnsemblPlantsGene:Bra014091	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A09
PANTHER:PTHR12378	PANTHER:PTHR12378:SF11	PFAM:PF05903	SEG:seg	SMART:SM01179	UniParc:UPI0002546918
UniProt:M4DC78	MapMan:19.4.1.7	:	:	:	:

Description

AT1G47740 (E=2e-142) | unknown protein

Coordinates

chrA08:-:3592739..3593851

Molecular Weight (calculated)

31542.9 Da

IEP (calculated)

9.689

GRAVY (calculated)

-0.399

Length

281 amino acids

Sequence
(BLAST)

001: MLKGEAEPKQ RKGWSNSLLE FRSGFGEKMK LASKKRWKSL APLNLKSKSV ARFCFFSKLK SSNHGPDRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPAQVREFME DTACSYYGNM YHLIAKNCNH FCHDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA ISHDDPDGQI SEEESEKRSL TTSSFSCLSS ISMRQKQLST SSLLIQSPLR GCLPPWQLKR SKSDTSSLKG R

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.