Factsheet for Bra011312.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 3
plastid 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75209	Canola	nucleus	100.0	100.0
KRH15787	Soybean	mitochondrion	55.22	59.07
KRH05264	Soybean	cytosol, mitochondrion	55.22	58.8
VIT_04s0008g05960.t01	Wine grape	mitochondrion	56.96	57.96
Bra020487.1-P	Field mustard	mitochondrion	53.91	57.41
Bra009823.1-P	Field mustard	cytosol, mitochondrion	54.78	57.27
Bra032034.1-P	Field mustard	nucleus, plasma membrane	60.43	55.82
KRH61696	Soybean	cytosol	50.87	53.92
KRH52364	Soybean	mitochondrion	51.74	53.12
Bra035161.1-P	Field mustard	cytosol	48.26	48.68
Bra003580.1-P	Field mustard	cytosol	47.39	47.81
Bra012661.1-P	Field mustard	cytosol	40.0	42.99
Bra024951.1-P	Field mustard	cytosol	40.0	37.86
Bra032229.1-P	Field mustard	nucleus	39.13	32.26
Bra014091.1-P	Field mustard	nucleus	39.13	32.03
Bra007813.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	57.39	24.09
Bra013908.1-P	Field mustard	cytosol	24.35	22.86
Bra013910.1-P	Field mustard	cytosol	24.78	22.71
Bra010452.1-P	Field mustard	cytosol	23.91	21.65

Protein Annotations

EnsemblPlants:Bra011312.1	EnsemblPlants:Bra011312.1-P	EnsemblPlantsGene:Bra011312	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A07
PANTHER:PTHR12378	PANTHER:PTHR12378:SF12	PFAM:PF05903	SEG:seg	SMART:SM01179	UniParc:UPI0002546629
UniProt:M4D4A8	MapMan:19.4.1.7	:	:	:	:

Description

AT4G31980 (E=7e-095) | unknown protein

Coordinates

chrA01:-:2784095..2785412

Molecular Weight (calculated)

25772.3 Da

IEP (calculated)

10.105

GRAVY (calculated)

-0.546

Length

230 amino acids

Sequence
(BLAST)

001: MMFCRNVCVR RKKKKNPGSV PVYLNVYDLT PMNVYGYWLG IGIYHSGLEV HGVEYGYGAH EHSSTGIFKV EPKKCPGFTF RKSILVGETE MKAKEIGSFM
101: EELSDEYQGS KYHLITRNCN HFCNDVCLKL TQKSIPSWVN RLARLGFLCN CVLPASLNEM KVKQVGKDGK LLEVGESKKN KKKKKQKKAR SRSGPLASSS
201: DSRLDNNKPS HARSISTGNP PCSASFCPLK

Best Arabidopsis Sequence Match ( AT4G31980.1 )
(BLAST)

001: MFCRNVSVRR KKNSGTVPVY LNVYDLTPMN VYGYWLGIGI YHSGLEVHGV EYGYGAHEKS SSGIFEVEPK KCPGFTFRKS ILVGETEMKA KEVRSFMEKL
101: SEEYQGNKYH LITRNCNHFC NHVSLKLTHK SIPSWVNRLA RLGFLCNCVL PACLNETKVK RVGKDGKLLL EGENTKKKKR KKKIRRSRSG PLSSSSSNAR
201: LDNTPTHNRS ISTGNPPLSA SPSCPLRPRL PSVASGAEDQ NPPSRYLNAS FCSEVQCHRL CFAYERMNQN EGDALVDSIK AKLAFLSSLS TKCCIYKVPN
301: KLRRLNPDAY TPRLVSFGPL HRGKEELQAM EDQKYRYLLS FIPRTNSSLE DLVRLARTWE QNARSCYAED VKLHSDEFVE MLVVDGSFLV ELLLRSHYPR
401: LRGENDRIFG NSMMITDVCR DMILIENQLP FFVVKEIFLL LLNYYQQGTP SIIQLAQRHF SYFLSRIDDE KFITEPEHFV DLLRSCYLPQ FPIKLEYTTV
501: KVDNAPEATE LHTAGVRFKP AETSSCLLDI SFADGVLKIP TIVVDDLTES LYKNIIGFEQ CRCSNKNFLD YIMLLGCFIK SPTDADLLIH SGIIVNYLGN
601: SVDVSNLFNS ISKEVIYDRR FYFSMLSENL QAYCNTPWNR WKAILRRDYF HNPWAVASVF AALLLLLLTF IQSVCSILAL

Arabidopsis Description

PPPDE thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:O49393]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.