Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23657 | Canola | nucleus | 100.0 | 99.64 |
| AT1G47740.3 | Thale cress | nucleus | 92.47 | 92.47 |
| Bra014091.1-P | Field mustard | nucleus | 87.81 | 87.19 |
| VIT_18s0001g12090.t01 | Wine grape | mitochondrion | 64.16 | 72.47 |
| KRH05795 | Soybean | mitochondrion | 63.8 | 70.92 |
| Solyc12g089060.1.1 | Tomato | mitochondrion | 62.72 | 70.85 |
| PGSC0003DMT400039949 | Potato | mitochondrion | 62.37 | 70.45 |
| KRH15239 | Soybean | mitochondrion | 63.08 | 70.12 |
| GSMUA_Achr7P25980_001 | Banana | mitochondrion | 50.9 | 68.27 |
| KRH49521 | Soybean | mitochondrion | 59.14 | 65.74 |
| KRG89196 | Soybean | mitochondrion | 58.78 | 65.34 |
| Solyc04g080030.2.1 | Tomato | mitochondrion | 56.27 | 64.61 |
| GSMUA_Achr4P07180_001 | Banana | cytosol, nucleus, peroxisome | 53.05 | 64.35 |
| KRH38144 | Soybean | mitochondrion | 49.1 | 63.72 |
| Zm00001d028130_P001 | Maize | mitochondrion | 56.27 | 62.8 |
| PGSC0003DMT400064873 | Potato | nucleus | 55.91 | 62.65 |
| Solyc01g109430.2.1 | Tomato | cytosol, mitochondrion, nucleus | 55.56 | 62.25 |
| Os03t0198500-01 | Rice | mitochondrion | 54.84 | 61.94 |
| EER95329 | Sorghum | mitochondrion | 55.91 | 61.9 |
| TraesCS4A01G040500.1 | Wheat | mitochondrion | 54.84 | 61.69 |
| TraesCS4B01G261700.1 | Wheat | mitochondrion | 54.48 | 61.29 |
| TraesCS4D01G261500.1 | Wheat | mitochondrion | 54.48 | 61.29 |
| Zm00001d048173_P001 | Maize | mitochondrion | 55.56 | 61.26 |
| GSMUA_Achr1P22650_001 | Banana | mitochondrion, nucleus, plasma membrane | 55.56 | 60.08 |
| KXG39054 | Sorghum | plastid | 52.69 | 59.27 |
| GSMUA_Achr4P14060_001 | Banana | cytosol, plastid, vacuole | 34.77 | 58.79 |
| Zm00001d048567_P002 | Maize | endoplasmic reticulum, plasma membrane | 53.76 | 57.69 |
| PGSC0003DMT400071605 | Potato | mitochondrion | 58.78 | 57.54 |
| VIT_03s0063g02130.t01 | Wine grape | mitochondrion | 58.78 | 48.96 |
| Bra020487.1-P | Field mustard | mitochondrion | 37.63 | 48.61 |
| HORVU4Hr1G070620.3 | Barley | cytosol, nucleus, plastid | 56.63 | 47.88 |
| Bra009823.1-P | Field mustard | cytosol, mitochondrion | 37.63 | 47.73 |
| Bra012661.1-P | Field mustard | cytosol | 34.05 | 44.39 |
| Bra035161.1-P | Field mustard | cytosol | 36.2 | 44.3 |
| Bra003580.1-P | Field mustard | cytosol | 35.84 | 43.86 |
| Bra024951.1-P | Field mustard | cytosol | 34.41 | 39.51 |
| Bra032034.1-P | Field mustard | nucleus, plasma membrane | 35.13 | 39.36 |
| Bra011312.1-P | Field mustard | nucleus | 32.26 | 39.13 |
| Bra010452.1-P | Field mustard | cytosol | 19.0 | 20.87 |
| Bra013908.1-P | Field mustard | cytosol | 17.56 | 20.0 |
| Bra013910.1-P | Field mustard | cytosol | 17.92 | 19.92 |
| Bra007813.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 34.77 | 17.7 |
Protein Annotations
Description
AT1G47740 (E=3e-140) | unknown protein
Coordinates
chrA05:+:12670631..12671777
Molecular Weight (calculated)
31626.1 Da
IEP (calculated)
9.222
GRAVY (calculated)
-0.423
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKGEAEPKQ KRGWSESLLE FRSGLGEKMK TEPKKRWKSL EPLHLKSKSV ARFCFFSKIK SNNYGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YANSGVFEVE PRQCPGFKFK KSIFIGTTNL NPGQVREFME NMACSYYGNM YHLIVKNCNH FCQDACYKLT GKKIPKWVNR LVEIGSVCSC
201: ILPESLKITA VCHDPDEQIP EEENEKRSLT SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPFQLKRSK SNSSSLKEM
101: GVEYAFGAHD YANSGVFEVE PRQCPGFKFK KSIFIGTTNL NPGQVREFME NMACSYYGNM YHLIVKNCNH FCQDACYKLT GKKIPKWVNR LVEIGSVCSC
201: ILPESLKITA VCHDPDEQIP EEENEKRSLT SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPFQLKRSK SNSSSLKEM
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.