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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g080030.2.1 Tomato mitochondrion 83.16 97.53
PGSC0003DMT400039949 Potato mitochondrion 71.23 82.19
VIT_18s0001g12090.t01 Wine grape mitochondrion 65.61 75.71
KRH15239 Soybean mitochondrion 64.56 73.31
KRH05795 Soybean mitochondrion 64.56 73.31
KRH38144 Soybean mitochondrion 52.28 69.3
GSMUA_Achr7P25980_001 Banana mitochondrion 47.72 65.38
CDY10616 Canola cytosol, nucleus, peroxisome 57.54 65.34
Zm00001d028130_P001 Maize mitochondrion 57.19 65.2
PGSC0003DMT400064873 Potato nucleus 56.84 65.06
TraesCS4A01G040500.1 Wheat mitochondrion 56.49 64.92
TraesCS4B01G261700.1 Wheat mitochondrion 56.49 64.92
TraesCS4D01G261500.1 Wheat mitochondrion 56.49 64.92
Os03t0198500-01 Rice mitochondrion 55.79 64.37
EER95329 Sorghum mitochondrion 56.84 64.29
Zm00001d048173_P001 Maize mitochondrion 56.84 64.03
GSMUA_Achr4P07180_001 Banana cytosol, nucleus, peroxisome 50.88 63.04
GSMUA_Achr1P22650_001 Banana mitochondrion, nucleus, plasma membrane 56.84 62.79
AT1G47740.3 Thale cress nucleus 59.3 60.57
CDY25677 Canola nucleus 55.79 59.11
KXG39054 Sorghum plastid 51.23 58.87
GSMUA_Achr4P14060_001 Banana cytosol, plastid, vacuole 34.04 58.79
Bra032229.1-P Field mustard nucleus 57.54 58.78
CDY17002 Canola nucleus 57.89 58.72
CDY23657 Canola nucleus 57.54 58.57
Bra014091.1-P Field mustard nucleus 57.54 58.36
CDY17812 Canola nucleus 57.54 58.36
Zm00001d048567_P002 Maize endoplasmic reticulum, plasma membrane 51.23 56.15
HORVU4Hr1G070620.3 Barley cytosol, nucleus, plastid 57.19 49.39
PGSC0003DMT400002750 Potato cytosol 36.14 45.98
PGSC0003DMT400067477 Potato cytosol 34.74 44.8
PGSC0003DMT400036630 Potato cytosol 32.28 41.26
PGSC0003DMT400073331 Potato nucleus 32.98 29.75
PGSC0003DMT400026255 Potato cytosol 18.6 22.36
PGSC0003DMT400018924 Potato cytosol 16.49 22.17
Protein Annotations
EnsemblPlants:PGSC0003DMT400071605EnsemblPlantsGene:PGSC0003DMG400027858EntrezGene:102591447Gene3D:3.90.1720.30InterPro:PPPDE_domMEROPS:C97.A09
PANTHER:PTHR12378PANTHER:PTHR12378:SF11PFAM:PF05903PGSC:PGSC0003DMG400027858RefSeq:XP_006367307.1RefSeq:XP_015160842.1
RefSeq:XP_015160843.1SMART:SM01179UniParc:UPI000295AFFDUniProt:M1CP14MapMan:19.4.1.7:
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400027858]
Coordinates
chr4:-:69399484..69406368
Molecular Weight (calculated)
32012.4 Da
IEP (calculated)
9.877
GRAVY (calculated)
-0.504
Length
285 amino acids
Sequence
(BLAST)
001: MSLKSKKGWK SGMPLRLKTK SSAHFCLLPK TKSDRFAPGE TPVCLNVYDL TPMNNYVYWA GFGIFHSGVE VHGVEYAFGA HDYPTSGVFE VEPRQCPGFK
101: FRKSIFVGTT KLDPNQVREF IEHQAAAYNG DSYHLIVKNC NHFCKDICHK LTGKKIPKWV NRLAKLGSAF NCMLPEALKV AAVEDEPNGP EYDSEKRRLR
201: SAFSCFSSIS TRQQKLSAVK DVPNGPEYDG EKRRLRSAFS CFSSISTRQQ KLSTSSLFLQ SPVKGCLPSL ELRKSTKCSS KEKQT
Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.