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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23657 Canola nucleus 99.6 89.29
CDY25677 Canola nucleus 93.63 87.36
AT1G47740.3 Thale cress nucleus 93.63 84.23
CDY17812 Canola nucleus 88.05 78.65
CDY17002 Canola nucleus 88.05 78.65
VIT_18s0001g12090.t01 Wine grape mitochondrion 71.31 72.47
KRH05795 Soybean mitochondrion 70.92 70.92
Solyc12g089060.1.1 Tomato mitochondrion 69.72 70.85
PGSC0003DMT400039949 Potato mitochondrion 69.32 70.45
KRH15239 Soybean mitochondrion 70.12 70.12
GSMUA_Achr7P25980_001 Banana mitochondrion 56.57 68.27
KRH49521 Soybean mitochondrion 65.74 65.74
KRG89196 Soybean mitochondrion 65.34 65.34
Solyc04g080030.2.1 Tomato mitochondrion 62.55 64.61
GSMUA_Achr4P07180_001 Banana cytosol, nucleus, peroxisome 58.96 64.35
KRH38144 Soybean mitochondrion 54.58 63.72
Zm00001d028130_P001 Maize mitochondrion 62.55 62.8
PGSC0003DMT400064873 Potato nucleus 62.15 62.65
Solyc01g109430.2.1 Tomato cytosol, mitochondrion, nucleus 61.75 62.25
Os03t0198500-01 Rice mitochondrion 60.96 61.94
EER95329 Sorghum mitochondrion 62.15 61.9
TraesCS4A01G040500.1 Wheat mitochondrion 60.96 61.69
TraesCS4B01G261700.1 Wheat mitochondrion 60.56 61.29
TraesCS4D01G261500.1 Wheat mitochondrion 60.56 61.29
Zm00001d048173_P001 Maize mitochondrion 61.75 61.26
GSMUA_Achr1P22650_001 Banana mitochondrion, nucleus, plasma membrane 61.75 60.08
KXG39054 Sorghum plastid 58.57 59.27
GSMUA_Achr4P14060_001 Banana cytosol, plastid, vacuole 38.65 58.79
PGSC0003DMT400071605 Potato mitochondrion 65.34 57.54
Zm00001d048567_P002 Maize endoplasmic reticulum, plasma membrane 58.57 56.54
VIT_03s0063g02130.t01 Wine grape mitochondrion 64.94 48.66
CDY05475 Canola mitochondrion 41.83 48.61
CDY07077 Canola cytosol, mitochondrion 41.83 47.73
CDY05376 Canola cytosol, mitochondrion 41.04 47.69
CDY65538 Canola cytosol, mitochondrion 41.43 47.27
CDY65539 Canola cytosol, mitochondrion 41.43 47.27
CDX88162 Canola cytosol, mitochondrion 41.43 47.27
HORVU4Hr1G070620.3 Barley cytosol, nucleus, plastid 61.75 46.97
CDX90471 Canola cytosol 38.65 45.33
CDY39951 Canola cytosol 40.64 44.74
CDY09624 Canola cytosol 38.25 44.65
CDX67961 Canola cytosol 39.84 43.86
CDX79359 Canola cytosol 39.84 43.86
CDX87334 Canola cytosol 40.24 43.53
CDY27921 Canola cytosol 37.45 42.34
CDX76571 Canola cytosol 37.85 42.04
CDX76766 Canola nucleus 39.44 41.95
CDX77757 Canola cytosol 38.65 39.92
CDY35370 Canola nucleus, plasma membrane 39.04 39.84
CDY64684 Canola cytosol 38.25 39.51
CDY62507 Canola nucleus, plasma membrane 37.85 39.42
CDX75209 Canola nucleus 35.86 39.13
CDX68806 Canola nucleus 37.45 30.32
CDY49480 Canola cytosol 21.12 20.95
CDY66007 Canola cytosol 21.12 20.87
CDX94426 Canola cytosol 20.32 20.24
CDX89402 Canola cytosol 19.92 19.92
CDX89404 Canola cytosol 19.12 19.59
CDX94429 Canola cytosol 19.12 19.59
CDY56277 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole 39.04 17.88
Protein Annotations
EnsemblPlants:CDY10616EnsemblPlantsGene:GSBRNA2T00032598001Gene3D:3.90.1720.30InterPro:PPPDE_domKEGG:00261+3.4.-.-KEGG:00310+3.4.-.-
KEGG:00550+3.4.-.-KEGG:00780+3.4.-.-MEROPS:C97.A09PANTHER:PTHR12378PANTHER:PTHR12378:SF11PFAM:PF05903
ProteinID:CDY10616ProteinID:CDY10616.1SEG:segSMART:SM01179UniParc:UPI0004EDC01DUniProt:A0A078FB53
MapMan:19.4.1.7:::::
Description
BnaC03g69980DBnaC03g69980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB53]
Coordinates
chrLK032004:-:874234..875164
Molecular Weight (calculated)
28466.3 Da
IEP (calculated)
9.104
GRAVY (calculated)
-0.341
Length
251 amino acids
Sequence
(BLAST)
001: MKTEPKKRWK SLEPLHLKSK SVARFCFFSK IKSNNYGPGR APVYLNVYDL TPINGYIYWA GLGIFHSGVE VHGVEYAFGA HDYANSGVFE VEPRQCPGFK
101: FKKSIFIGTT NLNPAQVREF MENMACSYYG NMYHLIVKNC NHFCQDACYK LTGKKIPKWV NRLVEIGSVC SCILPESLKI TAVCHDPDEQ IPEEENEKRS
201: LTSSFSCLSS ISMRQKQLST SSLFLQSPLR GCLPPFQLKR SKSNSSSLKE M
Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.