Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035161.1-P | Field mustard | cytosol | 98.28 | 100.0 |
| CDY39951 | Canola | cytosol | 97.41 | 99.12 |
| AT1G80690.2 | Thale cress | cytosol | 90.09 | 90.48 |
| CDX67961 | Canola | cytosol | 84.91 | 86.4 |
| CDX79359 | Canola | cytosol | 84.91 | 86.4 |
| KRH44526 | Soybean | mitochondrion | 65.09 | 69.59 |
| KRH47381 | Soybean | cytosol | 63.36 | 67.12 |
| VIT_09s0002g08960.t01 | Wine grape | plasma membrane | 64.66 | 65.5 |
| PGSC0003DMT400036630 | Potato | cytosol | 61.64 | 64.13 |
| Solyc03g117100.2.1 | Tomato | cytosol | 61.64 | 63.56 |
| CDX88162 | Canola | cytosol, mitochondrion | 56.47 | 59.55 |
| CDY65539 | Canola | cytosol, mitochondrion | 56.47 | 59.55 |
| CDY65538 | Canola | cytosol, mitochondrion | 56.47 | 59.55 |
| CDY07077 | Canola | cytosol, mitochondrion | 56.03 | 59.09 |
| CDY05475 | Canola | mitochondrion | 53.88 | 57.87 |
| CDY05376 | Canola | cytosol, mitochondrion | 53.02 | 56.94 |
| GSMUA_Achr4P01900_001 | Banana | mitochondrion | 50.86 | 52.21 |
| GSMUA_Achr3P04560_001 | Banana | mitochondrion | 49.57 | 50.66 |
| CDX76766 | Canola | nucleus | 50.43 | 49.58 |
| Solyc06g068380.2.1 | Tomato | cytosol | 55.6 | 48.86 |
| CDY35370 | Canola | nucleus, plasma membrane | 51.72 | 48.78 |
| CDY62507 | Canola | nucleus, plasma membrane | 50.43 | 48.55 |
| CDX75209 | Canola | nucleus | 47.84 | 48.26 |
| CDX90471 | Canola | cytosol | 38.79 | 42.06 |
| PGSC0003DMT400073331 | Potato | nucleus | 55.6 | 40.82 |
| CDY09624 | Canola | cytosol | 37.5 | 40.47 |
| CDY10616 | Canola | cytosol, nucleus, peroxisome | 43.53 | 40.24 |
| GSMUA_Achr11P... | Banana | mitochondrion | 54.74 | 40.06 |
| CDX76571 | Canola | cytosol | 37.5 | 38.5 |
| CDY27921 | Canola | cytosol | 36.64 | 38.29 |
| CDX77757 | Canola | cytosol | 39.66 | 37.86 |
| CDY25677 | Canola | nucleus | 43.53 | 37.55 |
| CDY64684 | Canola | cytosol | 39.22 | 37.45 |
| CDX68806 | Canola | nucleus | 49.57 | 37.1 |
| CDY17812 | Canola | nucleus | 43.97 | 36.3 |
| CDY23657 | Canola | nucleus | 43.53 | 36.07 |
| CDY17002 | Canola | nucleus | 43.53 | 35.94 |
| HORVU7Hr1G029950.1 | Barley | plastid | 37.93 | 35.77 |
| Zm00001d045118_P001 | Maize | plastid | 37.07 | 35.54 |
| KXG19474 | Sorghum | plastid | 39.66 | 35.11 |
| TraesCS7D01G147600.1 | Wheat | plastid | 37.93 | 34.38 |
| TraesCS7A01G146100.1 | Wheat | plastid | 37.5 | 34.25 |
| TraesCS7B01G048600.1 | Wheat | plastid | 37.93 | 33.98 |
| Os06t0182100-00 | Rice | plastid | 38.36 | 33.97 |
| CDX94429 | Canola | cytosol | 26.29 | 24.9 |
| CDY49480 | Canola | cytosol | 26.72 | 24.51 |
| CDX89404 | Canola | cytosol | 25.86 | 24.49 |
| CDX94426 | Canola | cytosol | 26.29 | 24.21 |
| CDY66007 | Canola | cytosol | 26.29 | 24.02 |
| CDX89402 | Canola | cytosol | 25.86 | 23.9 |
| CDY56277 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 51.29 | 21.72 |
Protein Annotations
| EnsemblPlants:CDX87334 | EnsemblPlantsGene:GSBRNA2T00146302001 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | KEGG:00261+3.4.-.- | KEGG:00310+3.4.-.- |
| KEGG:00550+3.4.-.- | KEGG:00780+3.4.-.- | MEROPS:C97.A04 | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF17 | PFAM:PF05903 |
| ProteinID:CDX87334 | ProteinID:CDX87334.1 | SEG:seg | SMART:SM01179 | UniParc:UPI0004EBE9E0 | MapMan:19.4.1.7 |
Description
BnaA07g35390D
Coordinates
chrLK031850:-:194890..196359
Molecular Weight (calculated)
25495.4 Da
IEP (calculated)
8.877
GRAVY (calculated)
-0.391
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCRKNSSVV DRGNVPVYLN VYDLTPINGY AYWFGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEELSE
101: IYKGSSYNLI TKNCNHFCDE ICIKLTGNPI PSWVNRLARI GKLSGFMCNC VLPATINATK LGNNRINQDK SCEAETEKKK LTGGSSRESS TTIDTPSSSS
201: SSPSVQVRGR SRKRRPRAMH PSSPVILGSS TV
101: IYKGSSYNLI TKNCNHFCDE ICIKLTGNPI PSWVNRLARI GKLSGFMCNC VLPATINATK LGNNRINQDK SCEAETEKKK LTGGSSRESS TTIDTPSSSS
201: SSPSVQVRGR SRKRRPRAMH PSSPVILGSS TV
001: MLCRKNSSLV DRGNVPVYLN VYDLTPINGY AYWLGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEQLAD
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GKFSGFMCNC VLPATINATR FGNNRVNQDK SCEAENEKKK LTSVSSRERS TIATPSSSSS
201: SPSVQVRGRS RKRRPRALQP SSPLTLGSSS V
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GKFSGFMCNC VLPATINATR FGNNRVNQDK SCEAENEKKK LTSVSSRERS TIATPSSSSS
201: SPSVQVRGRS RKRRPRALQP SSPLTLGSSS V
Arabidopsis Description
F23A5.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9SAI9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.