Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17002 | Canola | nucleus | 98.22 | 98.22 |
| AT1G47740.3 | Thale cress | nucleus | 90.39 | 91.04 |
| CDY25677 | Canola | nucleus | 84.34 | 88.1 |
| CDY10616 | Canola | cytosol, nucleus, peroxisome | 78.65 | 88.05 |
| CDY23657 | Canola | nucleus | 86.83 | 87.14 |
| VIT_18s0001g12090.t01 | Wine grape | mitochondrion | 63.7 | 72.47 |
| KRH05795 | Soybean | mitochondrion | 62.63 | 70.12 |
| KRH15239 | Soybean | mitochondrion | 61.92 | 69.32 |
| Solyc12g089060.1.1 | Tomato | mitochondrion | 60.85 | 69.23 |
| PGSC0003DMT400039949 | Potato | mitochondrion | 60.5 | 68.83 |
| GSMUA_Achr7P25980_001 | Banana | mitochondrion | 49.82 | 67.31 |
| KRG89196 | Soybean | mitochondrion | 58.36 | 65.34 |
| KRH49521 | Soybean | mitochondrion | 58.36 | 65.34 |
| Solyc04g080030.2.1 | Tomato | mitochondrion | 55.87 | 64.61 |
| Zm00001d028130_P001 | Maize | mitochondrion | 57.3 | 64.4 |
| GSMUA_Achr4P07180_001 | Banana | cytosol, nucleus, peroxisome | 52.67 | 64.35 |
| KRH38144 | Soybean | mitochondrion | 49.11 | 64.19 |
| EER95329 | Sorghum | mitochondrion | 56.94 | 63.49 |
| TraesCS4A01G040500.1 | Wheat | mitochondrion | 55.87 | 63.31 |
| TraesCS4B01G261700.1 | Wheat | mitochondrion | 55.52 | 62.9 |
| TraesCS4D01G261500.1 | Wheat | mitochondrion | 55.52 | 62.9 |
| Zm00001d048173_P001 | Maize | mitochondrion | 56.58 | 62.85 |
| Os03t0198500-01 | Rice | mitochondrion | 54.8 | 62.35 |
| PGSC0003DMT400064873 | Potato | nucleus | 55.16 | 62.25 |
| Solyc01g109430.2.1 | Tomato | cytosol, mitochondrion, nucleus | 54.8 | 61.85 |
| GSMUA_Achr1P22650_001 | Banana | mitochondrion, nucleus, plasma membrane | 55.52 | 60.47 |
| GSMUA_Achr4P14060_001 | Banana | cytosol, plastid, vacuole | 35.23 | 60.0 |
| KXG39054 | Sorghum | plastid | 52.31 | 59.27 |
| Zm00001d048567_P002 | Maize | endoplasmic reticulum, plasma membrane | 54.09 | 58.46 |
| PGSC0003DMT400071605 | Potato | mitochondrion | 58.36 | 57.54 |
| HORVU4Hr1G070620.3 | Barley | cytosol, nucleus, plastid | 57.65 | 49.09 |
| CDY05475 | Canola | mitochondrion | 37.72 | 49.07 |
| CDY07077 | Canola | cytosol, mitochondrion | 37.72 | 48.18 |
| CDY05376 | Canola | cytosol, mitochondrion | 37.01 | 48.15 |
| VIT_03s0063g02130.t01 | Wine grape | mitochondrion | 57.3 | 48.06 |
| CDY65538 | Canola | cytosol, mitochondrion | 37.37 | 47.73 |
| CDY65539 | Canola | cytosol, mitochondrion | 37.37 | 47.73 |
| CDX88162 | Canola | cytosol, mitochondrion | 37.37 | 47.73 |
| CDX90471 | Canola | cytosol | 35.23 | 46.26 |
| CDY09624 | Canola | cytosol | 35.23 | 46.05 |
| CDY39951 | Canola | cytosol | 36.3 | 44.74 |
| CDY27921 | Canola | cytosol | 34.88 | 44.14 |
| CDX87334 | Canola | cytosol | 36.3 | 43.97 |
| CDX79359 | Canola | cytosol | 35.59 | 43.86 |
| CDX76571 | Canola | cytosol | 35.23 | 43.81 |
| CDX67961 | Canola | cytosol | 35.23 | 43.42 |
| CDX76766 | Canola | nucleus | 36.3 | 43.22 |
| CDX77757 | Canola | cytosol | 36.65 | 42.39 |
| CDY64684 | Canola | cytosol | 36.65 | 42.39 |
| CDY62507 | Canola | nucleus, plasma membrane | 34.88 | 40.66 |
| CDY35370 | Canola | nucleus, plasma membrane | 35.59 | 40.65 |
| CDX75209 | Canola | nucleus | 32.38 | 39.57 |
| CDX68806 | Canola | nucleus | 33.81 | 30.65 |
| CDY49480 | Canola | cytosol | 19.57 | 21.74 |
| CDY66007 | Canola | cytosol | 19.57 | 21.65 |
| CDX94426 | Canola | cytosol | 18.86 | 21.03 |
| CDX94429 | Canola | cytosol | 18.15 | 20.82 |
| CDX89402 | Canola | cytosol | 18.51 | 20.72 |
| CDX89404 | Canola | cytosol | 17.79 | 20.41 |
| CDY56277 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 35.94 | 18.43 |
Protein Annotations
| EnsemblPlants:CDY17812 | EnsemblPlantsGene:GSBRNA2T00002090001 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | KEGG:00261+3.4.-.- | KEGG:00310+3.4.-.- |
| KEGG:00550+3.4.-.- | KEGG:00780+3.4.-.- | MEROPS:C97.A09 | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF11 | PFAM:PF05903 |
| ProteinID:CDY17812 | ProteinID:CDY17812.1 | SEG:seg | SMART:SM01179 | UniParc:UPI0004EF12A7 | UniProt:A0A078FYC6 |
| MapMan:19.4.1.7 | : | : | : | : | : |
Description
BnaC08g04260DBnaC08g04260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYC6]
Coordinates
chrLK032078:-:112064..114709
Molecular Weight (calculated)
31560.0 Da
IEP (calculated)
9.783
GRAVY (calculated)
-0.394
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKGEAEPKQ RKGWSNSLLE FRSGFGEKMK LVSKKRWKSL APLNLKSKSV ARFCFFSKLK SSNHGPDRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPAQVREFME DTACSYYGNM YHLIAKNCNH FCHDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VGRDDPDGQI SEEESEKRSL TTSSFTCLSS ISMRQKQLST SSLLIQSPLR GCLPPWQLKR SKSDTSSLKG R
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPAQVREFME DTACSYYGNM YHLIAKNCNH FCHDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VGRDDPDGQI SEEESEKRSL TTSSFTCLSS ISMRQKQLST SSLLIQSPLR GCLPPWQLKR SKSDTSSLKG R
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.