Factsheet for VIT_03s0063g02130.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89196	Soybean	mitochondrion	59.1	78.88
VIT_18s0001g12090.t01	Wine grape	mitochondrion	57.91	78.54
KRH49521	Soybean	mitochondrion	58.21	77.69
PGSC0003DMT400064873	Potato	nucleus	56.12	75.5
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	56.12	75.5
GSMUA_Achr7P25980_001	Banana	mitochondrion	44.78	72.12
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	46.57	67.83
KXG39054	Sorghum	plastid	48.66	65.73
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	50.15	65.12
CDY10616	Canola	cytosol, nucleus, peroxisome	48.66	64.94
Zm00001d028130_P001	Maize	mitochondrion	48.36	64.8
Os03t0198500-01	Rice	mitochondrion	47.16	63.97
EER95329	Sorghum	mitochondrion	47.76	63.49
Zm00001d048173_P001	Maize	mitochondrion	47.76	63.24
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	31.04	63.03
TraesCS4A01G040500.1	Wheat	mitochondrion	45.97	62.1
TraesCS4B01G261700.1	Wheat	mitochondrion	45.67	61.69
TraesCS4D01G261500.1	Wheat	mitochondrion	45.67	61.69
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	47.16	60.77
AT1G47740.3	Thale cress	nucleus	50.15	60.22
Bra032229.1-P	Field mustard	nucleus	48.96	58.78
CDY23657	Canola	nucleus	48.96	58.57
CDY17002	Canola	nucleus	48.66	58.01
Bra014091.1-P	Field mustard	nucleus	48.36	57.65
CDY25677	Canola	nucleus	46.27	57.62
CDY17812	Canola	nucleus	48.06	57.3
VIT_04s0008g05960.t01	Wine grape	mitochondrion	34.03	50.44
VIT_11s0016g04860.t01	Wine grape	cytosol, nucleus, peroxisome	31.04	48.6
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	46.57	47.27
VIT_09s0002g08960.t01	Wine grape	plasma membrane	31.34	45.85
VIT_18s0072g01100.t01	Wine grape	cytosol	17.91	43.48
VIT_16s0050g01050.t01	Wine grape	cytosol	17.01	23.46

Protein Annotations

EntrezGene:100262358	wikigene:100262358	MapMan:19.4.1.7	Gene3D:3.90.1720.30	ProteinID:CBI32554	ProteinID:CBI32554.3
UniProt:D7TPY1	EMBL:FN596006	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100262358
wikigene:LOC100262358	PFAM:PF05903	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF4	SMART:SM01179
TMHMM:TMhelix	UniParc:UPI0001BE3CCA	ArrayExpress:VIT_03s0063g02130	EnsemblPlantsGene:VIT_03s0063g02130	EnsemblPlants:VIT_03s0063g02130.t01	RefSeq:XP_002280976
RefSeq:XP_002280976.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3:-:5419479..5421506

Molecular Weight (calculated)

38205.4 Da

IEP (calculated)

8.894

GRAVY (calculated)

-0.070

Length

335 amino acids

Sequence
(BLAST)

001: MKSGSKKQWN SIVPFRLRGK SATRFCMYPK VKSAGRSPGN TPVYLNVYDL TAINGYVYWA GLGVFHSGVE VHGVEYAFGA HDYPTSGVFE VEPRQCPGFK
101: FRKAIFMGTT CLDPGQFREF MERYSANYNG DTYHLIIKNC NHFCEDICNK LTGNRIPKWV NRLARIGSLC NCILPQALKA SAVRHKPNFR NYEIEKKKLR
201: TAFSCLSSIS MHQKEVSLSS LFLHSHYKGC LPPWELKTSK NSRLKEGKLL NFHFTFSSVL YYVFGLVIVD LLDLYCNVID LDMLSYIFIA EEMDGCILLK
301: PSLTYNGFYF LFFSGLNILC LCISNPANPV EEYSL

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.