Factsheet for HORVU4Hr1G070620.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G261500.1	Wheat	mitochondrion	74.24	98.79
TraesCS4A01G040500.1	Wheat	mitochondrion	73.94	98.39
TraesCS4B01G261700.1	Wheat	mitochondrion	73.64	97.98
Os03t0198500-01	Rice	mitochondrion	68.48	91.5
Zm00001d028130_P001	Maize	mitochondrion	68.79	90.8
EER95329	Sorghum	mitochondrion	68.79	90.08
Zm00001d048173_P001	Maize	mitochondrion	67.58	88.14
VIT_18s0001g12090.t01	Wine grape	mitochondrion	53.94	72.06
KRH15239	Soybean	mitochondrion	53.03	69.72
KRH05795	Soybean	mitochondrion	53.03	69.72
GSMUA_Achr7P25980_001	Banana	mitochondrion	42.42	67.31
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	46.36	66.52
PGSC0003DMT400039949	Potato	mitochondrion	49.09	65.59
Solyc12g089060.1.1	Tomato	mitochondrion	48.79	65.18
KRH38144	Soybean	mitochondrion	42.42	65.12
KRH49521	Soybean	mitochondrion	49.39	64.94
KRG89196	Soybean	mitochondrion	49.09	64.54
Solyc04g080030.2.1	Tomato	mitochondrion	47.27	64.2
PGSC0003DMT400064873	Potato	nucleus	47.58	63.05
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	49.09	62.79
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	46.97	62.25
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	30.91	61.82
CDY10616	Canola	cytosol, nucleus, peroxisome	46.97	61.75
AT1G47740.3	Thale cress	nucleus	49.09	58.06
CDY17002	Canola	nucleus	49.39	58.01
Bra014091.1-P	Field mustard	nucleus	49.09	57.65
CDY17812	Canola	nucleus	49.09	57.65
CDY25677	Canola	nucleus	46.67	57.25
PGSC0003DMT400071605	Potato	mitochondrion	49.39	57.19
CDY23657	Canola	nucleus	48.18	56.79
Bra032229.1-P	Field mustard	nucleus	47.88	56.63
VIT_03s0063g02130.t01	Wine grape	mitochondrion	47.27	46.57
HORVU0Hr1G009550.1	Barley	cytosol, peroxisome, plasma membrane	27.88	38.33
HORVU7Hr1G029950.1	Barley	plastid	25.76	34.55
HORVU2Hr1G098080.1	Barley	peroxisome	26.97	34.1
HORVU7Hr1G002080.2	Barley	cytosol	15.15	25.38
HORVU1Hr1G049510.1	Barley	cytosol	9.7	23.88
HORVU1Hr1G049520.3	Barley	cytosol, peroxisome, plastid	17.58	23.87

Protein Annotations

EnsemblPlants:HORVU4Hr1G070620.3	EnsemblPlantsGene:HORVU4Hr1G070620	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF11
PFAM:PF05903	SEG:seg	SMART:SM01179	UniParc:UPI000B46F48E	UniProt:A0A287PKX1	MapMan:19.4.1.7

Description

No Description!

Coordinates

chrchr4H:-:576961923..576966945

Molecular Weight (calculated)

36786.3 Da

IEP (calculated)

10.430

GRAVY (calculated)

-0.571

Length

330 amino acids

Sequence
(BLAST)

001: LGCSSAPFPS HHEPSPPRTQ PEPTPLHHHN CAPPQGFPRI PPLPSPPQLQ PRPHAARPRP LASLLPSPPR RPPAGLRPPP RNMKLRTKRP GWKSLVPLQL
101: SRKSTMRFFL FPKVQASGQS PNDTPVYLNV YDLTPMNGYI YWAGLGIFHS GIEVHGVEYA FGAHDYPTSG VFEVEPRQCP GFRFRKSIFL GTTCLDPIQV
201: RQFMELQSVN YNGDSYHLIM KNCNHFCKDM CYKLTGSKIP KWVNRLARIG AICNCLLPES LKISPVGHDP NSQPEDSEKR RLRNPLSCFS SISSQRALPP
301: SSSPFPPSPV KEPLPSSSSR KSSTASLKSR

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.