Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 2
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g109430.2.1 | Tomato | cytosol, mitochondrion, nucleus | 98.8 | 98.8 |
| KRG89196 | Soybean | mitochondrion | 75.5 | 74.9 |
| KRH49521 | Soybean | mitochondrion | 75.1 | 74.5 |
| GSMUA_Achr7P25980_001 | Banana | mitochondrion | 57.83 | 69.23 |
| GSMUA_Achr4P07180_001 | Banana | cytosol, nucleus, peroxisome | 61.04 | 66.09 |
| PGSC0003DMT400039949 | Potato | mitochondrion | 65.06 | 65.59 |
| Zm00001d028130_P001 | Maize | mitochondrion | 63.86 | 63.6 |
| TraesCS4B01G261700.1 | Wheat | mitochondrion | 62.25 | 62.5 |
| EER95329 | Sorghum | mitochondrion | 63.05 | 62.3 |
| CDY10616 | Canola | cytosol, nucleus, peroxisome | 62.65 | 62.15 |
| TraesCS4D01G261500.1 | Wheat | mitochondrion | 61.85 | 62.1 |
| TraesCS4A01G040500.1 | Wheat | mitochondrion | 61.45 | 61.69 |
| Zm00001d048173_P001 | Maize | mitochondrion | 62.65 | 61.66 |
| Os03t0198500-01 | Rice | mitochondrion | 61.04 | 61.54 |
| KXG39054 | Sorghum | plastid | 60.64 | 60.89 |
| GSMUA_Achr1P22650_001 | Banana | mitochondrion, nucleus, plasma membrane | 62.65 | 60.47 |
| GSMUA_Achr4P14060_001 | Banana | cytosol, plastid, vacuole | 39.36 | 59.39 |
| AT1G47740.3 | Thale cress | nucleus | 64.26 | 57.35 |
| Zm00001d048567_P002 | Maize | endoplasmic reticulum, plasma membrane | 59.44 | 56.92 |
| PGSC0003DMT400071605 | Potato | mitochondrion | 65.06 | 56.84 |
| VIT_03s0063g02130.t01 | Wine grape | mitochondrion | 75.5 | 56.12 |
| Bra032229.1-P | Field mustard | nucleus | 62.65 | 55.91 |
| CDY23657 | Canola | nucleus | 62.65 | 55.71 |
| CDY17002 | Canola | nucleus | 62.65 | 55.52 |
| CDY17812 | Canola | nucleus | 62.25 | 55.16 |
| Bra014091.1-P | Field mustard | nucleus | 62.25 | 55.16 |
| CDY25677 | Canola | nucleus | 59.44 | 55.02 |
| HORVU4Hr1G070620.3 | Barley | cytosol, nucleus, plastid | 63.05 | 47.58 |
| PGSC0003DMT400067477 | Potato | cytosol | 40.96 | 46.15 |
| PGSC0003DMT400002750 | Potato | cytosol | 39.36 | 43.75 |
| PGSC0003DMT400036630 | Potato | cytosol | 36.55 | 40.81 |
| PGSC0003DMT400073331 | Potato | nucleus | 36.95 | 29.11 |
| PGSC0003DMT400026255 | Potato | cytosol | 20.88 | 21.94 |
| PGSC0003DMT400018924 | Potato | cytosol | 16.06 | 18.87 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400064873 | EnsemblPlantsGene:PGSC0003DMG400025189 | EntrezGene:102598367 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | MEROPS:C97.A09 |
| PANTHER:PTHR12378 | PANTHER:PTHR12378:SF4 | PFAM:PF05903 | PGSC:PGSC0003DMG400025189 | RefSeq:XP_006365516.1 | SEG:seg |
| SMART:SM01179 | UniParc:UPI0002953C8A | UniProt:M1CD14 | MapMan:19.4.1.7 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400025189]
Coordinates
chr1:-:85706801..85711022
Molecular Weight (calculated)
28098.7 Da
IEP (calculated)
9.361
GRAVY (calculated)
-0.382
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSKLKNDLC SVVPLHLQGE SATRFCMFPK VKSACCSPGN TPVYLNVYDL TPVNGYFYWA GIGVFHTGIQ VHGVEYAFGA HDYPTSGVFE LEPRQCPGFK
101: FRKSVFMGTT YLDPIQLREF IARQSANYNG DSYHLIAKNC NHFSDDICYR LTGKRIPKWV NRLARVGSLC NCILPEALKA STVQHGTNAQ NYDSEKRKLR
201: SSFNCLSSIS MRQGEKEVSI SSLFLHSHYK GCLPPWESKK SRSRSLKEG
101: FRKSVFMGTT YLDPIQLREF IARQSANYNG DSYHLIAKNC NHFSDDICYR LTGKRIPKWV NRLARVGSLC NCILPEALKA STVQHGTNAQ NYDSEKRKLR
201: SSFNCLSSIS MRQGEKEVSI SSLFLHSHYK GCLPPWESKK SRSRSLKEG
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.