Factsheet for Zm00001d028130_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95329	Sorghum	mitochondrion	98.0	97.22
Zm00001d048173_P001	Maize	mitochondrion	96.4	95.26
TraesCS4D01G261500.1	Wheat	mitochondrion	90.0	90.73
Os03t0198500-01	Rice	mitochondrion	89.2	90.28
TraesCS4B01G261700.1	Wheat	mitochondrion	89.2	89.92
TraesCS4A01G040500.1	Wheat	mitochondrion	89.2	89.92
VIT_18s0001g12090.t01	Wine grape	mitochondrion	73.2	74.09
KRH15239	Soybean	mitochondrion	70.4	70.12
KRH05795	Soybean	mitochondrion	70.4	70.12
GSMUA_Achr7P25980_001	Banana	mitochondrion	58.0	69.71
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	90.8	68.79
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	63.2	68.7
KRH38144	Soybean	mitochondrion	57.6	66.98
PGSC0003DMT400039949	Potato	mitochondrion	66.0	66.8
Solyc12g089060.1.1	Tomato	mitochondrion	65.6	66.4
KRG89196	Soybean	mitochondrion	66.4	66.14
KRH49521	Soybean	mitochondrion	66.4	66.14
Solyc04g080030.2.1	Tomato	mitochondrion	62.4	64.2
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	66.0	63.95
PGSC0003DMT400064873	Potato	nucleus	63.6	63.86
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	63.6	63.86
CDY10616	Canola	cytosol, nucleus, peroxisome	62.8	62.55
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	41.2	62.42
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	62.0	59.62
AT1G47740.3	Thale cress	nucleus	64.4	57.71
CDY17002	Canola	nucleus	64.8	57.65
CDY17812	Canola	nucleus	64.4	57.3
Bra014091.1-P	Field mustard	nucleus	64.4	57.3
PGSC0003DMT400071605	Potato	mitochondrion	65.2	57.19
CDY25677	Canola	nucleus	61.2	56.88
Bra032229.1-P	Field mustard	nucleus	62.8	56.27
CDY23657	Canola	nucleus	62.8	56.07
Zm00001d002758_P002	Maize	cytosol	41.6	49.76
Zm00001d026190_P001	Maize	cytosol	41.2	49.52
VIT_03s0063g02130.t01	Wine grape	mitochondrion	64.8	48.36
Zm00001d017468_P001	Maize	cytosol	39.6	47.37
Zm00001d046249_P001	Maize	cytosol	38.0	45.02
Zm00001d045118_P001	Maize	plastid	31.6	32.64
Zm00001d027266_P001	Maize	mitochondrion, plastid	37.6	31.65
Zm00001d029725_P001	Maize	extracellular, mitochondrion	22.8	23.27
Zm00001d045580_P001	Maize	cytosol	24.8	23.13

Protein Annotations

EMBL:BT038432	EMBL:EU964940	EnsemblPlants:Zm00001d028130_P001	EnsemblPlants:Zm00001d028130_T001	EnsemblPlantsGene:Zm00001d028130	EntrezGene:100272295
Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A09	PANTHER:PTHR12378	PANTHER:PTHR12378:SF11	PFAM:PF05903
ProteinID:ONL94803.1	SEG:seg	SMART:SM01179	UniParc:UPI00017B6C4E	UniProt:B4FMU4	MapMan:19.4.1.7

Description

DeSI-like protein

Coordinates

chr1:-:23628624..23634749

Molecular Weight (calculated)

28282.0 Da

IEP (calculated)

10.053

GRAVY (calculated)

-0.460

Length

250 amino acids

Sequence
(BLAST)

001: MKLRTKRPEW KSLVPLQLSR LSRKSAMRFF LFPKVQSAGQ SPDDTPVYLN VYDLTPMNGY IYWAGLGIFH SGIEVHGVEY AFGAHDFPTS GVFEVEPRQC
101: PGFRFRKSIF LGTTCLDPIQ VRQFMELQSV NYNGDTYHLI TKNCNHFCKD MCYKLTGNKI PKWVNRLARI GAICNCLLPE SLKISPVGHD PNSQSEDSEK
201: RRLRNPFSCF SSISSHRQLP SSSPFPPSPV KGGLPRCSSR KSSTASPKNR

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.