Factsheet for Zm00001d046249_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89945	Sorghum	cytosol	93.84	93.84
TraesCS7D01G365100.1	Wheat	cytosol	77.73	79.61
TraesCS7B01G270200.1	Wheat	cytosol	77.73	79.61
TraesCS7A01G357600.1	Wheat	cytosol	77.73	79.61
Os06t0560400-01	Rice	cytosol	79.15	77.31
GSMUA_Achr5P06500_001	Banana	cytosol, extracellular, peroxisome	57.82	56.74
KRH03735	Soybean	nucleus	56.87	53.33
Zm00001d002758_P002	Maize	cytosol	52.61	53.11
GSMUA_Achr2P19400_001	Banana	plastid	54.5	53.0
VIT_11s0016g04860.t01	Wine grape	cytosol, nucleus, peroxisome	53.55	52.8
Zm00001d026190_P001	Maize	cytosol	51.66	52.4
Zm00001d017468_P001	Maize	cytosol	51.18	51.67
Solyc12g006880.1.1	Tomato	cytosol	53.08	50.0
PGSC0003DMT400002750	Potato	cytosol	53.08	50.0
KRH54877	Soybean	cytosol, peroxisome	44.55	49.74
KRH63012	Soybean	nucleus	53.55	49.13
Zm00001d028130_P001	Maize	mitochondrion	45.02	38.0
Zm00001d048173_P001	Maize	mitochondrion	44.08	36.76
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	45.02	36.54
Zm00001d027266_P001	Maize	mitochondrion, plastid	45.5	32.32
Zm00001d045118_P001	Maize	plastid	33.18	28.93
Zm00001d029725_P001	Maize	extracellular, mitochondrion	25.59	22.04
Zm00001d045580_P001	Maize	cytosol	25.59	20.15

Protein Annotations

EMBL:BT060453	EnsemblPlants:Zm00001d046249_P001	EnsemblPlants:Zm00001d046249_T001	EnsemblPlantsGene:Zm00001d046249	EntrezGene:100285913	Gene3D:3.90.1720.30
InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF13	PFAM:PF05903	ProteinID:AQL03968.1	SEG:seg
SMART:SM01179	UniParc:UPI0001948592	UniProt:C0HDP7	MapMan:19.4.1.7	:	:

Description

DeSI-like protein

Coordinates

chr9:-:76621682..76629303

Molecular Weight (calculated)

23036.7 Da

IEP (calculated)

5.235

GRAVY (calculated)

-0.308

Length

211 amino acids

Sequence
(BLAST)

001: MGGAVSGGAA VGDAAGAATY PVVLNVYDLT PVNNYLHWGG LGIFHSAVEV HGSEYSFGAH DHPSSGVFEV EPKSCPGFIY RCTVFIGHTT LNSLEFREFI
101: QRMASEYHGD TYHLISKNCN HFTDDLSTRL TGKSIPGWVN RLARLGAFCN CLLPEGLRLE STETKHLGDC RFSDGSNTTS NDNSDEDELE DKHLLPTTSV
201: GEDTIVKEIH R

Best Arabidopsis Sequence Match ( AT1G47740.1 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.