Factsheet for Zm00001d002758_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007888_P002
Zm00001d016570_P001
Zm00001d037747_P001
Zm00001d039455_P002
Zm00001d045580_P001
Zm00001d050563_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17486.1	Zm00001d016570_P001	AT1G27300.1	21798944
AT4G17486.1	Zm00001d050563_P001	AT1G27300.1	21798944
AT4G17486.1	Zm00001d007888_P002	AT2G39760.1	21798944
AT4G17486.1	Zm00001d045580_P001	AT4G25660.1	21798944
AT4G17486.1	Zm00001d045580_P001	AT4G25680.1	21798944
AT5G47310.1	Zm00001d037747_P001	AT1G55190.1	21798944
AT5G47310.1	Zm00001d039455_P002	AT1G55190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026190_P001	Maize	cytosol	91.87	92.31
EES11216	Sorghum	cytosol	91.87	92.31
Os04t0548000-01	Rice	cytosol	75.6	76.33
TraesCS2A01G416700.1	Wheat	cytosol	75.12	75.12
TraesCS2D01G413700.1	Wheat	cytosol	75.6	74.18
TraesCS2B01G435700.2	Wheat	cytosol	73.68	74.04
Zm00001d017468_P001	Maize	cytosol	67.94	67.94
GSMUA_Achr4P30040_001	Banana	mitochondrion	65.07	60.71
GSMUA_AchrUn_...	Banana	cytosol	62.2	60.47
HORVU2Hr1G098080.1	Barley	peroxisome	72.73	58.24
KRH04183	Soybean	cytosol	60.77	56.95
PGSC0003DMT400067477	Potato	cytosol	59.81	56.56
KRH77327	Soybean	cytosol	60.29	56.25
Solyc08g078220.2.1	Tomato	cytosol	59.33	56.11
KRH28159	Soybean	cytosol	59.81	55.8
KRH57475	Soybean	cytosol	58.37	54.71
CDX90471	Canola	cytosol	54.07	52.8
Zm00001d046249_P001	Maize	cytosol	53.11	52.61
CDY09624	Canola	cytosol	54.07	52.56
Bra012661.1-P	Field mustard	cytosol	53.59	52.34
CDX77757	Canola	cytosol	60.29	51.85
AT5G47310.1	Thale cress	cytosol	60.29	51.43
CDY64684	Canola	cytosol	59.33	51.03
Bra024951.1-P	Field mustard	cytosol	59.33	51.03
CDY27921	Canola	cytosol	54.07	50.9
AT4G17486.1	Thale cress	cytosol	54.55	50.89
GSMUA_Achr1P00440_001	Banana	mitochondrion	65.07	49.63
CDX76571	Canola	cytosol	52.63	48.67
Zm00001d028130_P001	Maize	mitochondrion	49.76	41.6
Zm00001d027266_P001	Maize	mitochondrion, plastid	58.37	41.08
Zm00001d048173_P001	Maize	mitochondrion	49.28	40.71
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	47.85	38.46
GSMUA_Achr5P12520_001	Banana	plastid	63.64	36.44
Zm00001d045118_P001	Maize	plastid	33.97	29.34
Zm00001d029725_P001	Maize	extracellular, mitochondrion	24.88	21.22
Zm00001d045580_P001	Maize	cytosol	23.45	18.28

Protein Annotations

EMBL:BT041794	EnsemblPlants:Zm00001d002758_P002	EnsemblPlants:Zm00001d002758_T002	EnsemblPlantsGene:Zm00001d002758	Gene3D:3.90.1720.30	InterPro:PPPDE_dom
PANTHER:PTHR12378	PANTHER:PTHR12378:SF35	PFAM:PF05903	ProteinID:ONM15278.1	SEG:seg	SMART:SM01179
UniParc:UPI0001A647E1	UniProt:B4FXF6	MapMan:19.4.1.7	:	:	:

Description

DeSI-like protein

Coordinates

chr2:-:21816101..21818936

Molecular Weight (calculated)

22988.0 Da

IEP (calculated)

5.192

GRAVY (calculated)

-0.156

Length

209 amino acids

Sequence
(BLAST)

001: MEAQNGSCGG APVVLNVYDL TPMNNYLYWF GLGIFHSGIE VHGMEYGFGA HQFPASGVFE VEPKSCPGFI YRRSVWMGTT DLSRAEFRSF IENLAGKYNG
101: NTYHLISKNC NHFTDDVCKS LTKKSIPGWV NRLARVGSFF NCLLPESIQV STVRHVPTQS AFSDDDMDSV SSSVLGDSDL GELDQHLLPS STADVHSIDV
201: PPNLAKDLL

Best Arabidopsis Sequence Match ( AT5G47310.1 )
(BLAST)

001: MRVLGLSSSL CSGEDKEEEE INGEGSLTPV YLNVYDLTPV NNYLYWFGLG IFHSGIEAHG FEYGYGAHEY SSSGVFEVEP RSCPGFIFRR SVLLGTTSMS
101: RSDFRSFMEK LSRKYHGDTY HLIAKNCNHF TEEVCLQVTG KPIPGWINRM ARVGSFCNCI LPESIQLSSV NHPEALEFSD DNDGSEESVA SSVSYETDGE
201: GSDHHLITAP NSDIAYLQDR PVRLARELLQ EPTDDTSPQY LLKRS

Arabidopsis Description

At5g47310 [Source:UniProtKB/TrEMBL;Acc:Q9LVS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.