Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G416700.1 | Wheat | cytosol | 97.6 | 97.13 |
| TraesCS2D01G413700.1 | Wheat | cytosol | 97.12 | 94.84 |
| EES11216 | Sorghum | cytosol | 75.96 | 75.96 |
| Zm00001d026190_P001 | Maize | cytosol | 75.0 | 75.0 |
| Zm00001d002758_P002 | Maize | cytosol | 74.04 | 73.68 |
| Os04t0548000-01 | Rice | cytosol | 72.6 | 72.95 |
| HORVU2Hr1G098080.1 | Barley | peroxisome | 89.9 | 71.65 |
| TraesCS6B01G280600.1 | Wheat | cytosol | 62.98 | 63.9 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.21 | 55.35 |
| GSMUA_Achr4P30040_001 | Banana | mitochondrion | 59.13 | 54.91 |
| PGSC0003DMT400067477 | Potato | cytosol | 53.85 | 50.68 |
| KRH04183 | Soybean | cytosol | 54.33 | 50.67 |
| Solyc08g078220.2.1 | Tomato | cytosol | 53.37 | 50.23 |
| TraesCS7B01G270200.1 | Wheat | cytosol | 49.04 | 49.51 |
| KRH57475 | Soybean | cytosol | 52.88 | 49.33 |
| CDX90471 | Canola | cytosol | 50.0 | 48.6 |
| TraesCS4B01G376300.2 | Wheat | vacuole | 55.29 | 48.52 |
| CDY09624 | Canola | cytosol | 50.0 | 48.37 |
| KRH28159 | Soybean | cytosol | 51.92 | 48.21 |
| KRH77327 | Soybean | cytosol | 51.92 | 48.21 |
| Bra012661.1-P | Field mustard | cytosol | 49.52 | 48.13 |
| AT4G17486.1 | Thale cress | cytosol | 50.96 | 47.32 |
| CDY27921 | Canola | cytosol | 50.48 | 47.3 |
| CDY64684 | Canola | cytosol | 53.85 | 46.09 |
| CDX77757 | Canola | cytosol | 53.85 | 46.09 |
| Bra024951.1-P | Field mustard | cytosol | 53.85 | 46.09 |
| CDX76571 | Canola | cytosol | 50.0 | 46.02 |
| AT5G47310.1 | Thale cress | cytosol | 53.37 | 45.31 |
| GSMUA_Achr1P00440_001 | Banana | mitochondrion | 58.65 | 44.53 |
| TraesCS4B01G261700.1 | Wheat | mitochondrion | 43.75 | 36.69 |
| GSMUA_Achr5P12520_001 | Banana | plastid | 55.77 | 31.78 |
| TraesCS7B01G048600.1 | Wheat | plastid | 35.1 | 28.19 |
| TraesCS1B01G205700.1 | Wheat | cytosol, peroxisome, plastid | 25.0 | 21.49 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G435700.2 | EnsemblPlantsGene:TraesCS2B01G435700 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF35 |
| PFAM:PF05903 | SEG:seg | SMART:SM01179 | MapMan:19.4.1.7 | : | : |
Description
No Description!
Coordinates
chr2B:-:625932204..625934503
Molecular Weight (calculated)
22797.7 Da
IEP (calculated)
6.070
GRAVY (calculated)
-0.236
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQNGSGGA AVVLNVYDLT PINDYLYWFG LGIFHSGIEV HGLEYAFGAH DLSTSGVFEV EPKRCPGYVY RRSVWMGTTE MSRAEFRSFV QTLAGKYDGN
101: TYHLISKNCN HFTDDVCKNI TKKPAPGWVN RLARVGYFFN RLLPKSIQVS TVTHAATHPA FSDDDVDSSG SSLNGDSDMD DLDQHLLPAA GTDLQSIVVS
201: PKPSKDLV
101: TYHLISKNCN HFTDDVCKNI TKKPAPGWVN RLARVGYFFN RLLPKSIQVS TVTHAATHPA FSDDDVDSSG SSLNGDSDMD DLDQHLLPAA GTDLQSIVVS
201: PKPSKDLV
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.