CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97393
KRG97837
KRH08874
KRH10001
KRH22653
KRH23330
KRH26664
KRH31032
KRH31520
KRH35244
KRH38387
KRH44167
KRH47141
KRH76090

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17486.1	KRG97393	AT1G27300.1	21798944
AT4G17486.1	KRH31520	AT1G27300.1	21798944
AT4G17486.1	KRH76090	AT1G27300.1	21798944
AT4G17486.1	KRG97837	AT2G39760.1	21798944
AT4G17486.1	KRH31032	AT2G39760.1	21798944
AT4G17486.1	KRH08874	AT4G25660.1	21798944
AT4G17486.1	KRH35244	AT4G25660.1	21798944
AT4G17486.1	KRH38387	AT4G25660.1	21798944
AT4G17486.1	KRH08874	AT4G25680.1	21798944
AT4G17486.1	KRH35244	AT4G25680.1	21798944
AT4G17486.1	KRH38387	AT4G25680.1	21798944
AT4G17486.1	KRH22653	AT5G22290.1	21798944
AT4G17486.1	KRH26664	AT5G22290.1	21798944
AT5G47310.1	KRH10001	AT1G55190.1	21798944
AT5G47310.1	KRH23330	AT1G55190.1	21798944
AT5G47310.1	KRH44167	AT1G55190.1	21798944
AT5G47310.1	KRH47141	AT1G55190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04183	Soybean	cytosol	91.93	91.93
KRH28159	Soybean	cytosol	72.65	72.32
KRH77327	Soybean	cytosol	71.75	71.43
Solyc08g078220.2.1	Tomato	cytosol	65.92	66.52
PGSC0003DMT400067477	Potato	cytosol	65.47	66.06
AT4G17486.1	Thale cress	cytosol	61.88	61.61
EES11216	Sorghum	cytosol	56.5	60.58
GSMUA_AchrUn_...	Banana	cytosol	57.85	60.0
CDY27921	Canola	cytosol	59.64	59.91
Bra012661.1-P	Field mustard	cytosol	56.95	59.35
Zm00001d026190_P001	Maize	cytosol	55.16	59.13
CDX90471	Canola	cytosol	56.5	58.88
CDX76571	Canola	cytosol	59.64	58.85
GSMUA_Achr4P30040_001	Banana	mitochondrion	58.74	58.48
Zm00001d002758_P002	Maize	cytosol	54.71	58.37
Os02t0655500-01	Rice	cytosol	53.36	58.33
CDY09624	Canola	cytosol	56.05	58.14
EES07522	Sorghum	cytosol	54.26	57.89
Os04t0548000-01	Rice	cytosol	53.36	57.49
Zm00001d017468_P001	Maize	cytosol	53.81	57.42
TraesCS6A01G243700.2	Wheat	cytosol	52.47	57.35
CDY64684	Canola	cytosol	62.33	57.2
CDX77757	Canola	cytosol	62.33	57.2
Bra024951.1-P	Field mustard	cytosol	62.33	57.2
TraesCS6B01G280600.1	Wheat	cytosol	52.47	57.07
TraesCS6D01G225900.1	Wheat	cytosol	52.47	57.07
AT5G47310.1	Thale cress	cytosol	62.33	56.73
TraesCS2B01G435700.2	Wheat	cytosol	49.33	52.88
TraesCS2A01G416700.1	Wheat	cytosol	49.33	52.63
Os03t0100900-01	Rice	plastid	56.95	51.84
TraesCS5A01G543200.2	Wheat	cytosol, peroxisome, vacuole	53.81	51.72
TraesCS2D01G413700.1	Wheat	cytosol	49.33	51.64
TraesCS4B01G376300.2	Wheat	vacuole	54.26	51.05
EER95706	Sorghum	mitochondrion	53.36	50.85
KRH03735	Soybean	nucleus	51.12	50.67
HORVU0Hr1G009550.1	Barley	cytosol, peroxisome, plasma membrane	54.26	50.42
KRH54877	Soybean	cytosol, peroxisome	42.15	49.74
KRH63012	Soybean	nucleus	49.78	48.26
GSMUA_Achr1P00440_001	Banana	mitochondrion	57.4	46.72
KRH05264	Soybean	cytosol, mitochondrion	43.95	45.37
KRH15787	Soybean	mitochondrion	43.05	44.65
HORVU2Hr1G098080.1	Barley	peroxisome	48.88	41.76
KRH38144	Soybean	mitochondrion	39.91	41.4
KRH15239	Soybean	mitochondrion	46.19	41.04
KRH05795	Soybean	mitochondrion	46.19	41.04
KRH61696	Soybean	cytosol	39.91	41.01
Zm00001d027266_P001	Maize	mitochondrion, plastid	54.26	40.74
KRH47381	Soybean	cytosol	39.91	40.64
KRH44526	Soybean	mitochondrion	39.46	40.55
KRH52364	Soybean	mitochondrion	39.91	39.73
KRH49521	Soybean	mitochondrion	43.5	38.65
KRG89196	Soybean	mitochondrion	43.05	38.25
GSMUA_Achr5P12520_001	Banana	plastid	54.71	33.42
KRH35244	Soybean	cytosol, peroxisome, plastid	26.46	24.58
KRH08874	Soybean	cytosol	25.56	23.27
KRH38387	Soybean	cytosol	25.56	22.98

Protein Annotations

EMBL:ACUP02002836	EnsemblPlants:KRH57475	EnsemblPlantsGene:GLYMA_05G063000	EntrezGene:100306242	Gene3D:3.90.1720.30	InterPro:PPPDE_dom
PANTHER:PTHR12378	PANTHER:PTHR12378:SF35	PFAM:PF05903	ProteinID:KRH57474.1	ProteinID:KRH57475	ProteinID:KRH57475.1
ProteinID:KRH57476.1	SEG:seg	SMART:SM01179	UniParc:UPI00023396A2	UniProt:I1K0T7	MapMan:19.4.1.7

Description

hypothetical protein

Coordinates

chr5:-:5984515..5991318

Molecular Weight (calculated)

24989.4 Da

IEP (calculated)

4.753

GRAVY (calculated)

-0.274

Length

223 amino acids

Sequence
(BLAST)

001: MPEFPLSSRL ERVQNSLREN GSLVYLNVYD LTPANNYLYA FGVGIFHSGI EVHGMEYGFG AHEYPTSGIF EVEPRSCPGF IFRCSVLLGR NDMSYSEFRS
101: FMERLSVKFH GDSYHLIAKN CNHFTDEVCQ QLTGKPIPAW VNRLARVGSF CNCLLPESLQ VAAVRHLPEH LALSDDEGLE SDGLSDSDES EDEDSNHHLL
201: TTPSGGELTI IKEKPMTLAR DLL

Best Arabidopsis Sequence Match ( AT1G47740.2 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.