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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG91301
KRG91356
KRG96232
KRG97103
KRG97374
KRG97837
KRG99095
KRH01102
KRH03247
KRH03601
KRH04634
KRH06355
KRH07108
KRH14738
KRH31032
KRH31544
KRH31661
KRH35470
KRH35520
KRH40151
KRH45896
KRH48783
KRH54345
KRH57111
KRH63594
KRH66562
KRH67976
KRH69115
KRH70713
KRH73429

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39760.1 KRG99095 AT1G26830.1 15618422
AT2G39760.1 KRH45896 AT1G26830.1 15618422
AT2G39760.1 KRH70713 AT1G26830.1 15618422
AT2G39760.1 KRG99095 AT1G26830.1 15659098
AT2G39760.1 KRH45896 AT1G26830.1 15659098
AT2G39760.1 KRH70713 AT1G26830.1 15659098
AT2G39760.1 KRG99095 AT1G26830.1 15772280
AT2G39760.1 KRH45896 AT1G26830.1 15772280
AT2G39760.1 KRH70713 AT1G26830.1 15772280
AT2G39760.1 KRH04634 AT1G52540.1 21798944
AT2G39760.1 KRG99095 AT1G69670.1 15618422
AT2G39760.1 KRH45896 AT1G69670.1 15618422
AT2G39760.1 KRH70713 AT1G69670.1 15618422
AT2G39760.1 KRG99095 AT1G69670.1 15659098
AT2G39760.1 KRH45896 AT1G69670.1 15659098
AT2G39760.1 KRH70713 AT1G69670.1 15659098
AT2G39760.1 KRG97837 AT2G39760.1 15618422
AT2G39760.1 KRH31032 AT2G39760.1 15618422
AT2G39760.1 KRG97837 AT2G39760.1 21798944
AT2G39760.1 KRH31032 AT2G39760.1 21798944
AT2G39760.1 KRG97374 AT3G23700.1 21798944
AT2G39760.1 KRH31544 AT3G23700.1 21798944
AT2G39760.1 KRH14738 AT3G43700.1 15618422
AT2G39760.1 KRH73429 AT3G43700.1 15618422
AT2G39760.1 KRH03247 AT3G54170.1 21798944
AT2G39760.1 KRH54345 AT3G54170.1 21798944
AT2G39760.1 KRH57111 AT3G54170.1 21798944
AT2G39760.1 KRH63594 AT3G54170.1 21798944
AT2G39760.1 KRH01102 AT3G60390.1 21798944
AT2G39760.1 KRH40151 AT3G60390.1 21798944
AT2G39760.1 KRH48783 AT3G60390.1 21798944
AT2G39760.1 KRH66562 AT3G60390.1 21798944
AT2G39760.1 KRG91356 AT4G14740.1 21798944
AT2G39760.1 KRH31661 AT4G14740.1 21798944
AT2G39760.1 KRH35470 AT4G14740.1 21798944
AT2G39760.1 KRH69115 AT4G14740.1 21798944
AT2G39760.1 KRG91301 AT4G14900.1 21798944
AT2G39760.1 KRH35520 AT4G14900.1 21798944
AT2G39760.1 KRG97103 AT4G22720.1 21798944
AT2G39760.1 KRH03601 AT4G22720.1 21798944
AT2G39760.1 KRG96232 AT5G06270.1 21798944
AT2G39760.1 KRH67976 AT5G06270.1 21798944
AT2G39760.1 KRH06355 AT5G14440.1 21798944
AT2G39760.1 KRH07108 AT5G14440.1 21798944
AT2G39760.1 KRH14738 AT5G21010.1 15618422
AT2G39760.1 KRH73429 AT5G21010.1 15618422
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG97837 Soybean cytosol 98.07 98.31
VIT_13s0019g02260.t01 Wine grape cytosol 72.29 73.89
PGSC0003DMT400069942 Potato cytosol 68.43 69.61
Solyc05g052960.2.1 Tomato cytosol 68.19 69.36
Bra000147.1-P Field mustard cytosol 61.45 66.75
CDX93238 Canola cytosol 62.65 65.66
Bra017053.1-P Field mustard cytosol 62.65 65.16
CDY07031 Canola cytosol 62.41 64.91
CDY07638 Canola cytosol 62.17 64.5
AT2G39760.1 Thale cress cytosol 63.37 64.46
GSMUA_Achr7P10650_001 Banana cytosol 62.89 64.44
Os07t0101400-01 Rice cytosol 60.24 63.29
TraesCS2A01G255800.1 Wheat cytosol 59.28 62.12
TraesCS2D01G266900.1 Wheat cytosol 59.04 61.87
EER97813 Sorghum plastid 59.76 61.69
CDY61778 Canola cytosol 62.17 61.14
KRH67156 Soybean plastid 56.14 56.83
KRH71465 Soybean plastid 56.39 56.8
HORVU2Hr1G064920.1 Barley plastid 58.8 56.74
KRG95474 Soybean plastid 55.9 56.59
KRH31976 Soybean plastid 56.14 56.42
GSMUA_Achr10P... Banana cytosol 25.54 56.08
KRH73429 Soybean cytosol, plastid 53.49 56.06
KRH14738 Soybean cytosol 53.25 55.81
KRG94057 Soybean mitochondrion 23.86 54.1
KRG88616 Soybean cytosol 30.12 53.42
Zm00001d007888_P002 Maize plastid 55.18 53.26
KRG94896 Soybean mitochondrion 53.98 51.85
KRH06640 Soybean mitochondrion, plastid 54.22 51.84
KRG88614 Soybean mitochondrion 38.31 50.96
KRH06645 Soybean cytosol 46.99 49.24
KRG94047 Soybean cytosol, mitochondrion, plastid 34.46 49.14
KRG94050 Soybean mitochondrion 43.61 47.88
KRG88615 Soybean mitochondrion 43.37 47.62
KRG94064 Soybean mitochondrion 42.65 46.83
KRG94069 Soybean cytosol 40.24 46.78
KRG94058 Soybean mitochondrion 40.72 44.95
KRG94056 Soybean cytosol 8.43 44.3
KRG94053 Soybean cytosol 19.28 42.78
KRG94052 Soybean cytosol 19.28 42.78
CDX93236 Canola cytosol 40.24 40.93
KRH06646 Soybean cytosol 27.23 37.05
Protein Annotations
Gene3D:1.25.40.420EntrezGene:100778300Gene3D:2.60.210.10Gene3D:3.30.710.10MapMan:35.1EMBL:ACUP02007119
InterPro:BPM_CInterPro:BTB/POZ_domEnsemblPlantsGene:GLYMA_11G222900GO:GO:0003674GO:GO:0005488GO:GO:0005515
UniProt:I1LMJ1InterPro:IPR000210InterPro:IPR002083InterPro:IPR008974EnsemblPlants:KRH31032ProteinID:KRH31032
ProteinID:KRH31032.1InterPro:MATH/TRAF_domPFAM:PF00651PFscan:PS50097PFscan:PS50144PANTHER:PTHR24411
PANTHER:PTHR24411:SF54InterPro:SKP1/BTB/POZ_sfSMART:SM00061SMART:SM00225SUPFAM:SSF49599SUPFAM:SSF54695
InterPro:TRAF-likeUniParc:UPI000233D13FSEG:seg:::
Description
hypothetical protein
Coordinates
chr11:+:31802057..31807574
Molecular Weight (calculated)
46207.4 Da
IEP (calculated)
5.873
GRAVY (calculated)
-0.164
Length
415 amino acids
Sequence
(BLAST)
001: MAELEEERMG GDFKPFSEGS SCSRSISETV NGSHQFTIKG YSLAKGMGAG KYIMSDTFTV GGYDWAIYFY PDGKNPEDNS MYVSVFIALA SDGTDVRALF
101: KLTLVDQSEK GNDKVHSHFD RPLESGPYTL KYKGSMWGYK RFFRRSLLEN SLYLKNDCLV MHCTVGVVKT RFEGSKQGVI VPQSDMGRDF KDLLESEVGC
201: DIVFKVKSES FKAHKLILAA RSPVFRAQFF GLVGDPTLEE VVVEDIEPFI FKAMLLFIYS DKLPGIYEVM DSMPLCSYTV MVQHLLAAAD LYNLDRLKLL
301: CESKLCEEIN TDNVATTLAL AEQHHCPQLK AICLKFIANP ANLGAVMQSE AFVHLKESCP SMLLELLETF ASVDDNSGQT LSRKRSGSSI YGQDLADGAA
401: AESVNPNGRR VRRRT
Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)
001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
Arabidopsis Description
BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.