Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07638 | Canola | cytosol | 92.65 | 97.75 |
| CDX93238 | Canola | cytosol | 79.62 | 84.85 |
| CDY07031 | Canola | cytosol | 79.38 | 83.96 |
| AT2G39760.1 | Thale cress | cytosol | 77.96 | 80.64 |
| VIT_13s0019g02260.t01 | Wine grape | cytosol | 62.8 | 65.27 |
| GSMUA_Achr10P... | Banana | cytosol | 28.2 | 62.96 |
| Solyc05g052960.2.1 | Tomato | cytosol | 60.66 | 62.75 |
| PGSC0003DMT400069942 | Potato | cytosol | 60.66 | 62.75 |
| GSMUA_Achr7P10650_001 | Banana | cytosol | 60.19 | 62.72 |
| KRH31032 | Soybean | nucleus | 61.14 | 62.17 |
| KRG97837 | Soybean | cytosol | 60.9 | 62.08 |
| Os07t0101400-01 | Rice | cytosol | 54.03 | 57.72 |
| TraesCS2D01G266900.1 | Wheat | cytosol | 54.03 | 57.58 |
| TraesCS2A01G255800.1 | Wheat | cytosol | 54.03 | 57.58 |
| EER97813 | Sorghum | plastid | 54.03 | 56.72 |
| CDY58342 | Canola | cytosol | 53.08 | 55.58 |
| CDY08064 | Canola | cytosol | 53.08 | 55.04 |
| CDY66705 | Canola | cytosol | 52.13 | 54.59 |
| CDY05245 | Canola | cytosol | 50.95 | 54.29 |
| CDY24708 | Canola | cytosol | 51.42 | 53.85 |
| HORVU2Hr1G064920.1 | Barley | plastid | 53.55 | 52.56 |
| Zm00001d007888_P002 | Maize | plastid | 51.18 | 50.23 |
| CDY18844 | Canola | cytosol | 50.71 | 49.88 |
| CDX70860 | Canola | cytosol | 51.9 | 49.77 |
| CDX93236 | Canola | cytosol | 47.39 | 49.02 |
| CDY09093 | Canola | cytosol, plastid | 42.42 | 48.77 |
| CDX92567 | Canola | cytosol | 50.71 | 48.75 |
| CDX88828 | Canola | plastid | 47.16 | 48.54 |
| CDX70957 | Canola | plastid | 47.16 | 48.54 |
| CDY02591 | Canola | cytosol | 45.73 | 48.25 |
| CDY13941 | Canola | cytosol | 50.0 | 48.06 |
| CDY29955 | Canola | plastid | 50.71 | 47.66 |
| CDY71585 | Canola | cytosol | 18.72 | 39.11 |
| CDY67137 | Canola | endoplasmic reticulum | 31.28 | 37.08 |
| CDY16586 | Canola | cytosol | 14.22 | 34.48 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:A0A078J8M7 | InterPro:BPM_C |
| InterPro:BTB/POZ_dom | EnsemblPlants:CDY61778 | ProteinID:CDY61778 | ProteinID:CDY61778.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00034356001 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom |
| PFAM:PF00651 | PFAM:PF00917 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF54 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like |
| UniParc:UPI0004EE964D | : | : | : | : | : |
Description
BnaC03g72570DBnaC03g72570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8M7]
Coordinates
chrLK034038:+:1520..4672
Molecular Weight (calculated)
46362.5 Da
IEP (calculated)
6.894
GRAVY (calculated)
-0.094
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFVHPPTNF EIGKTTHNAT AIMSTVVAGH PNSDSTSTTV METVNGSHQF TIKGYSLAKG MGPGRYIQSD VFSIAGYDWA IYFYPDGKNP EDNSAYVSLF
101: IALASDSSDI RALFELTLVD QSGKGRHKVH SHFDRTLEGG PYTLKCKGSM WGYKRFLRRT ALEASDYLKD DSLVINCTVG VVRARLEGPK QFGIVLPSSD
201: MGQGLKDLLD SEVGCDIAFQ VGDETYKAHK LILAARSPVF RAQFYGPIGN NNVERIVIED IEPSIFKAML SFIYTDVLPD VHEITGSASA SLITNMIQHL
301: LAAADLYDLG RLKVLCEVFL CEKLNVDNVA TTLALSEQYQ LSELKAFCLK FVTSPGNLRA VMKSEGFKHL SQSCPSMLSE LLSTVAAGDK ILTSEQASKK
401: RSLCSSVLAY DTNAARQLRR RT
101: IALASDSSDI RALFELTLVD QSGKGRHKVH SHFDRTLEGG PYTLKCKGSM WGYKRFLRRT ALEASDYLKD DSLVINCTVG VVRARLEGPK QFGIVLPSSD
201: MGQGLKDLLD SEVGCDIAFQ VGDETYKAHK LILAARSPVF RAQFYGPIGN NNVERIVIED IEPSIFKAML SFIYTDVLPD VHEITGSASA SLITNMIQHL
301: LAAADLYDLG RLKVLCEVFL CEKLNVDNVA TTLALSEQYQ LSELKAFCLK FVTSPGNLRA VMKSEGFKHL SQSCPSMLSE LLSTVAAGDK ILTSEQASKK
401: RSLCSSVLAY DTNAARQLRR RT
001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
Arabidopsis Description
BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.