Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77338 | Canola | nucleus | 32.3 | 100.0 |
| Bra023466.1-P | Field mustard | nucleus | 98.97 | 98.29 |
| CDX91061 | Canola | nucleus | 84.54 | 84.83 |
| CDX70566 | Canola | nucleus | 70.79 | 73.05 |
| CDX78578 | Canola | nucleus | 67.7 | 72.69 |
| AT5G14440.1 | Thale cress | nucleus | 65.29 | 65.07 |
| PGSC0003DMT400032840 | Potato | nucleus | 42.96 | 47.35 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 44.33 | 47.25 |
| KRH06355 | Soybean | nucleus | 45.36 | 46.48 |
| KRH07108 | Soybean | nucleus | 45.02 | 46.13 |
| Solyc02g093510.2.1 | Tomato | nucleus | 41.58 | 46.01 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 29.55 | 39.81 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 37.11 | 38.71 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 37.11 | 38.3 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 37.11 | 38.16 |
| GSMUA_Achr11P... | Banana | nucleus | 38.14 | 37.25 |
| Zm00001d025694_P001 | Maize | nucleus | 34.36 | 36.5 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 35.74 | 35.37 |
| KXG26564 | Sorghum | nucleus | 34.71 | 35.19 |
| CDY64957 | Canola | cytosol | 24.4 | 25.0 |
| CDY00873 | Canola | cytosol | 24.4 | 21.78 |
| CDY01087 | Canola | cytosol | 22.68 | 21.29 |
| CDY24130 | Canola | cytosol | 23.37 | 19.6 |
| CDX99929 | Canola | nucleus | 27.49 | 18.74 |
Protein Annotations
| EnsemblPlants:CDY70251 | EnsemblPlantsGene:GSBRNA2T00097619001 | InterPro:Surf2 | ncoils:Coil | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 |
| PFAM:PF05477 | ProteinID:CDY70251 | ProteinID:CDY70251.1 | SEG:seg | UniParc:UPI0004EF41B9 | UniProt:A0A078JXN9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaAnng33100DBnaAnng33100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXN9]
Coordinates
chrLK041596:-:752..2402
Molecular Weight (calculated)
32953.2 Da
IEP (calculated)
5.151
GRAVY (calculated)
-1.459
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATEEDMTP TTATATKEGA NLLGKPKYKK LENGRFRCVQ TGHELLEKDK KVYSESKRCR LGLIDHALSH SKPPLNLFEQ DPTSRSKLLC KLTGDTVNKT
101: EEHIWKHLNG RRFLNKLEEK EREKECGSVP EEGGEAVAKE DGVKEGKKKN KKKKKKDKKK KKKKELDEKE ERSGEDVTDG VENENGEEGE EKELDFWMPP
201: DGERWDFDDG GDRWGSDSEE EEEEPIGEID EDGEASLDDC IIGEVDEDGK NSLDETPESK KRKPEELSSS SLPSSKKKKN KKNKKVKTTA S
101: EEHIWKHLNG RRFLNKLEEK EREKECGSVP EEGGEAVAKE DGVKEGKKKN KKKKKKDKKK KKKKELDEKE ERSGEDVTDG VENENGEEGE EKELDFWMPP
201: DGERWDFDDG GDRWGSDSEE EEEEPIGEID EDGEASLDDC IIGEVDEDGK NSLDETPESK KRKPEELSSS SLPSSKKKKN KKNKKVKTTA S
001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASNKRK HEELGSSDLP SKKKNKKKKK KKNVEATSSS Y
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASNKRK HEELGSSDLP SKKKNKKKKK KKNVEATSSS Y
Arabidopsis Description
At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.