Factsheet for Zm00001d025694_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26564	Sorghum	nucleus	87.96	83.97
TraesCS2B01G356700.2	Wheat	nucleus	68.98	67.02
TraesCS2A01G325200.1	Wheat	nucleus	68.98	66.78
TraesCS2D01G337500.1	Wheat	nucleus	66.79	65.59
HORVU2Hr1G082940.1	Barley	nucleus	49.63	62.96
GSMUA_Achr11P...	Banana	nucleus	47.81	43.96
GSMUA_Achr2P21040_001	Banana	nucleus	46.35	43.2
VIT_14s0066g00260.t01	Wine grape	nucleus	40.15	40.29
KRH07108	Soybean	nucleus	40.51	39.08
Solyc02g093510.2.1	Tomato	nucleus	36.86	38.4
KRH06355	Soybean	nucleus	38.69	37.32
CDX78578	Canola	nucleus	36.86	37.27
CDX70566	Canola	nucleus	37.96	36.88
Bra006255.1-P	Field mustard	nucleus	36.86	36.73
AT5G40570.2	Thale cress	nucleus	28.1	36.49
PGSC0003DMT400032840	Potato	nucleus	35.04	36.36
AT5G14440.1	Thale cress	nucleus	37.59	35.27
CDX91061	Canola	nucleus	36.86	34.83
CDY70251	Canola	nucleus	36.5	34.36
Bra023466.1-P	Field mustard	nucleus	36.5	34.13
CDX77338	Canola	nucleus	9.49	27.66
CDY64957	Canola	cytosol	22.63	21.83
Bra034786.1-P	Field mustard	plastid	17.15	21.17
CDY00873	Canola	cytosol	22.99	19.33
CDY01087	Canola	cytosol	20.07	17.74
CDY24130	Canola	cytosol	20.8	16.43
CDX99929	Canola	nucleus	25.55	16.39
Bra014992.1-P	Field mustard	nucleus	16.06	14.06

Protein Annotations

EMBL:BT062720	EnsemblPlants:Zm00001d025694_P001	EnsemblPlants:Zm00001d025694_T001	EnsemblPlantsGene:Zm00001d025694	InterPro:Surf2	PANTHER:PTHR32175
PANTHER:PTHR32175:SF2	PFAM:PF05477	ProteinID:AQK44278.1	SEG:seg	UniParc:UPI0001948FDE	UniProt:C0P351
MapMan:35.2	:	:	:	:	:

Description

Surfeit locus protein 2 (SURF2)

Coordinates

chr10:+:126527371..126529992

Molecular Weight (calculated)

29880.7 Da

IEP (calculated)

6.534

GRAVY (calculated)

-1.158

Length

274 amino acids

Sequence
(BLAST)

001: MAKKKGSAAA AAAMADETDV SSPQGSAPGS EGGGEKEGAF LLGEPTWEDA GGGRWRCAET GHELPEREKE AYARSRACRL ALIDHAVAQK KPPLNAFKPH
101: PEHKSKLVCK ITGDTINKLE DHIWKHINGK RFLNKLERVE DRMASGEMPD GEPVKSNEVA KKSKSSKKDK KKANVASTSL PREPKPEMAD SDDPDFWVPP
201: VGSRWDDDDG KDRWESLPGK PNLAKNEGGS DDDGGDDNDT ADKDDAESME LASRTKRMSI EAAGPRKKKP KKEQ

Best Arabidopsis Sequence Match ( AT5G14440.1 )
(BLAST)

001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY

Arabidopsis Description

At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.