Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G356700.2 | Wheat | nucleus | 96.47 | 96.81 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 95.41 | 96.77 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 71.73 | 93.98 |
| Zm00001d025694_P001 | Maize | nucleus | 66.78 | 68.98 |
| KXG26564 | Sorghum | nucleus | 68.9 | 67.94 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 42.4 | 43.96 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 44.88 | 43.2 |
| GSMUA_Achr11P... | Banana | nucleus | 44.17 | 41.95 |
| PGSC0003DMT400032840 | Potato | nucleus | 38.87 | 41.67 |
| Solyc02g093510.2.1 | Tomato | nucleus | 37.81 | 40.68 |
| KRH07108 | Soybean | nucleus | 40.64 | 40.49 |
| KRH06355 | Soybean | nucleus | 40.28 | 40.14 |
| CDX91061 | Canola | nucleus | 38.87 | 37.93 |
| CDX78578 | Canola | nucleus | 35.69 | 37.27 |
| CDY70251 | Canola | nucleus | 38.16 | 37.11 |
| Bra023466.1-P | Field mustard | nucleus | 38.16 | 36.86 |
| Bra006255.1-P | Field mustard | nucleus | 35.69 | 36.73 |
| CDX70566 | Canola | nucleus | 36.4 | 36.52 |
| AT5G14440.1 | Thale cress | nucleus | 37.1 | 35.96 |
| AT5G40570.2 | Thale cress | nucleus | 26.15 | 35.07 |
| CDX77338 | Canola | nucleus | 9.54 | 28.72 |
| CDY64957 | Canola | cytosol | 23.32 | 23.24 |
| Bra034786.1-P | Field mustard | plastid | 17.31 | 22.07 |
| CDY00873 | Canola | cytosol | 22.97 | 19.94 |
| CDY01087 | Canola | cytosol | 20.49 | 18.71 |
| CDY24130 | Canola | cytosol | 22.26 | 18.16 |
| CDX99929 | Canola | nucleus | 27.21 | 18.03 |
| Bra014992.1-P | Field mustard | nucleus | 16.61 | 15.02 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G325200.1 | EnsemblPlantsGene:TraesCS2A01G325200 | InterPro:Surf2 | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | PFAM:PF05477 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:555333222..555336961
Molecular Weight (calculated)
31003.6 Da
IEP (calculated)
5.561
GRAVY (calculated)
-1.220
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKGKAAAA AAASASDSGA SSPQGSVEGG GEKEGGFLLG QPTWEDAGGG RWRCAETGHE LPEREKDAYA RSRACRLALI DHGVAHKKPP LNAFKPHPEH
101: KSKLICNITG DTINKSEEHI WKHVNGKRFL NKLEKLEEKM ASGETGKVEG EQSNEVAKKS KSTKKKDKKK EKKEKKKAAV VNPSLPREPE PEIDDSDDSE
201: FWVPPVGSRW DDDDGKDRWE SSPGKDDIAE DEGASDDEDD DEMADKDDEV SEELASSRTK RLSVEAVGPS SFATRKKKPR KDE
101: KSKLICNITG DTINKSEEHI WKHVNGKRFL NKLEKLEEKM ASGETGKVEG EQSNEVAKKS KSTKKKDKKK EKKEKKKAAV VNPSLPREPE PEIDDSDDSE
201: FWVPPVGSRW DDDDGKDRWE SSPGKDDIAE DEGASDDEDD DEMADKDDEV SEELASSRTK RLSVEAVGPS SFATRKKKPR KDE
001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASNKRK HEELGSSDLP SKKKNKKKKK KKNVEATSSS Y
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASNKRK HEELGSSDLP SKKKNKKKKK KKNVEATSSS Y
Arabidopsis Description
At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.