Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400032840 | Potato | nucleus | 89.35 | 89.02 |
KRH07108 | Soybean | nucleus | 55.51 | 51.41 |
KRH06355 | Soybean | nucleus | 55.51 | 51.41 |
VIT_14s0066g00260.t01 | Wine grape | nucleus | 50.19 | 48.35 |
Bra006255.1-P | Field mustard | nucleus | 45.25 | 43.27 |
CDX70566 | Canola | nucleus | 46.01 | 42.91 |
AT5G14440.1 | Thale cress | nucleus | 47.53 | 42.81 |
CDX78578 | Canola | nucleus | 44.11 | 42.8 |
CDX91061 | Canola | nucleus | 46.77 | 42.41 |
Bra023466.1-P | Field mustard | nucleus | 46.39 | 41.64 |
CDY70251 | Canola | nucleus | 46.01 | 41.58 |
HORVU2Hr1G082940.1 | Barley | nucleus | 33.46 | 40.74 |
GSMUA_Achr2P21040_001 | Banana | nucleus | 44.49 | 39.8 |
GSMUA_Achr11P... | Banana | nucleus | 44.11 | 38.93 |
KXG26564 | Sorghum | nucleus | 42.21 | 38.68 |
TraesCS2D01G337500.1 | Wheat | nucleus | 40.68 | 38.35 |
TraesCS2A01G325200.1 | Wheat | nucleus | 40.68 | 37.81 |
TraesCS2B01G356700.2 | Wheat | nucleus | 40.3 | 37.59 |
Zm00001d025694_P001 | Maize | nucleus | 38.4 | 36.86 |
CDX77338 | Canola | nucleus | 12.55 | 35.11 |
Protein Annotations
EnsemblPlants:Solyc02g093510.2.1 | EnsemblPlantsGene:Solyc02g093510.2 | InterPro:Surf2 | ncoils:Coil | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 |
PFAM:PF05477 | SEG:seg | UniParc:UPI00027686E4 | UniProt:K4BDE7 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2:+:54354600..54357527
Molecular Weight (calculated)
29245.0 Da
IEP (calculated)
7.635
GRAVY (calculated)
-1.281
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKASGVGE GGDGSTGKEG YKLLGNPTFK KLENGRFKCV QTGHELPEHA RDSYAHSKHC RLGLIDAALS KNKPPLNMFN QDPLNRSKLI CKLTGDTVNK
101: SEEHIWKHMS GKRFLRMLEK KETETEMENG GLEKQVENEA AKKTDSKANR RDKKKNKKKE IEDASKVISE IRDSSGKNSG SEDDDEFWMP PVGARWDNDD
201: GGDRWGSGSE SEEEEEDAIG QDGGTEEENH DTGELSKRAK RMSLEIGPSS FASRKKKKKT SAT
101: SEEHIWKHMS GKRFLRMLEK KETETEMENG GLEKQVENEA AKKTDSKANR RDKKKNKKKE IEDASKVISE IRDSSGKNSG SEDDDEFWMP PVGARWDNDD
201: GGDRWGSGSE SEEEEEDAIG QDGGTEEENH DTGELSKRAK RMSLEIGPSS FASRKKKKKT SAT
001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
Arabidopsis Description
At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.