Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400032840 | Potato | nucleus | 49.08 | 50.76 |
Solyc02g093510.2.1 | Tomato | nucleus | 48.35 | 50.19 |
KRH06355 | Soybean | nucleus | 51.28 | 49.3 |
KRH07108 | Soybean | nucleus | 49.45 | 47.54 |
HORVU2Hr1G082940.1 | Barley | nucleus | 37.0 | 46.76 |
CDX78578 | Canola | nucleus | 44.69 | 45.02 |
CDX91061 | Canola | nucleus | 47.62 | 44.83 |
Bra023466.1-P | Field mustard | nucleus | 47.62 | 44.37 |
Bra006255.1-P | Field mustard | nucleus | 44.69 | 44.36 |
CDY70251 | Canola | nucleus | 47.25 | 44.33 |
AT5G14440.1 | Thale cress | nucleus | 46.89 | 43.84 |
CDX70566 | Canola | nucleus | 45.05 | 43.62 |
TraesCS2D01G337500.1 | Wheat | nucleus | 44.32 | 43.37 |
TraesCS2B01G356700.2 | Wheat | nucleus | 44.32 | 42.91 |
TraesCS2A01G325200.1 | Wheat | nucleus | 43.96 | 42.4 |
GSMUA_Achr2P21040_001 | Banana | nucleus | 43.96 | 40.82 |
KXG26564 | Sorghum | nucleus | 42.86 | 40.77 |
Zm00001d025694_P001 | Maize | nucleus | 40.29 | 40.15 |
GSMUA_Achr11P... | Banana | nucleus | 42.12 | 38.59 |
CDX77338 | Canola | nucleus | 12.82 | 37.23 |
Protein Annotations
ArrayExpress:VIT_14s0066g00260 | EMBL:FN596252 | EnsemblPlants:VIT_14s0066g00260.t01 | EnsemblPlantsGene:VIT_14s0066g00260 | EntrezGene:100262754 | EntrezGene:LOC100262754 |
InterPro:Surf2 | ncoils:Coil | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | PFAM:PF05477 | ProteinID:CCB58451 |
ProteinID:CCB58451.1 | RefSeq:XP_002271099 | RefSeq:XP_002271099.1 | SEG:seg | TIGR:TC67477 | unigene:Vvi.6779 |
UniParc:UPI00015C9C91 | UniProt:F6HUT3 | wikigene:100262754 | wikigene:LOC100262754 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr14:+:26798226..26801642
Molecular Weight (calculated)
31206.4 Da
IEP (calculated)
7.541
GRAVY (calculated)
-1.368
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAEQRSKE EEEKVEEEKK KKVGHEGSNL LGPPTFEALA NGRFKCVETG HEMPPNAVDS YSQSKRCRLG LIDFALSHKK TPLNLFKQDP VSRSKLICKL
101: TGDTINKTEE HIWKHINGRR FLNKLEQKEA EKQMSNRKVV DKGDQMQQKD GEKHKKKDKK KKKKKQEKEV DENISEARKS EVDEIDKNSD TEEAEFWMPP
201: VGDRWDSDDG GDRWGSDSDL ECDIDEVNGT DGAEEEHGNE SRELSKRTKR LSIEVGPSSF ASRKKKSKTN SKC
101: TGDTINKTEE HIWKHINGRR FLNKLEQKEA EKQMSNRKVV DKGDQMQQKD GEKHKKKDKK KKKKKQEKEV DENISEARKS EVDEIDKNSD TEEAEFWMPP
201: VGDRWDSDDG GDRWGSDSDL ECDIDEVNGT DGAEEEHGNE SRELSKRTKR LSIEVGPSSF ASRKKKSKTN SKC
001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
Arabidopsis Description
At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.