Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 59.86 | 59.06 |
| KXG26564 | Sorghum | nucleus | 46.94 | 48.08 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 34.69 | 47.22 |
| Zm00001d025694_P001 | Maize | nucleus | 43.2 | 46.35 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 43.54 | 45.39 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 42.86 | 45.16 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 43.2 | 44.88 |
| Solyc02g093510.2.1 | Tomato | nucleus | 39.8 | 44.49 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 40.82 | 43.96 |
| PGSC0003DMT400032840 | Potato | nucleus | 38.78 | 43.18 |
| AT5G40570.2 | Thale cress | nucleus | 29.59 | 41.23 |
| KRH07108 | Soybean | nucleus | 39.46 | 40.85 |
| KRH06355 | Soybean | nucleus | 39.12 | 40.49 |
| CDX91061 | Canola | nucleus | 36.39 | 36.9 |
| Bra006255.1-P | Field mustard | nucleus | 34.35 | 36.73 |
| CDX78578 | Canola | nucleus | 33.67 | 36.53 |
| CDX70566 | Canola | nucleus | 35.03 | 36.52 |
| AT5G14440.1 | Thale cress | nucleus | 35.71 | 35.96 |
| CDY70251 | Canola | nucleus | 35.37 | 35.74 |
| Bra023466.1-P | Field mustard | nucleus | 35.37 | 35.49 |
| CDX77338 | Canola | nucleus | 8.84 | 27.66 |
| CDY64957 | Canola | cytosol | 24.15 | 25.0 |
| Bra034786.1-P | Field mustard | plastid | 18.37 | 24.32 |
| CDY01087 | Canola | cytosol | 22.11 | 20.97 |
| CDY00873 | Canola | cytosol | 22.45 | 20.25 |
| CDY24130 | Canola | cytosol | 21.43 | 18.16 |
| CDX99929 | Canola | nucleus | 25.51 | 17.56 |
| Bra014992.1-P | Field mustard | nucleus | 17.35 | 16.29 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P21040_001 | EnsemblPlants:GSMUA_Achr2T21040_001 | EnsemblPlantsGene:GSMUA_Achr2G21040_001 | InterPro:Surf2 | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 |
| PFAM:PF05477 | SEG:seg | UniParc:UPI0002964984 | UniProt:M0S9U5 | MapMan:35.2 | : |
Description
surfeit locus protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G21040_001]
Coordinates
chr2:-:20699587..20707944
Molecular Weight (calculated)
32682.5 Da
IEP (calculated)
8.812
GRAVY (calculated)
-1.028
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSAAGGTPP QNPTLAAGES ERRRSPIRKK TATRTRDASG KEDVVMEEEK EGAFLLGEPT FLDLGGGRLR CVETGHELLA KDEEAYGRTK ACRLALIDAA
101: VAQKKPPLNM FQPHPTSKSQ LVCKLTGDSV NKSEEHIWKH INGRKFHNKL EQKEMEKHSS AEAVEKDTKQ SKKQVKSTLG SRNRVRKKDM NMNDSHTKKT
201: KADDDDDMVE PEFWVPPVGS RWDLDDGKDR WDPQTNMVDE ADDGSGLDGI SEKDDPETIE LSNRTKRMSI VVGPSSFASR KKKIKKAATL PNGS
101: VAQKKPPLNM FQPHPTSKSQ LVCKLTGDSV NKSEEHIWKH INGRKFHNKL EQKEMEKHSS AEAVEKDTKQ SKKQVKSTLG SRNRVRKKDM NMNDSHTKKT
201: KADDDDDMVE PEFWVPPVGS RWDLDDGKDR WDPQTNMVDE ADDGSGLDGI SEKDDPETIE LSNRTKRMSI VVGPSSFASR KKKIKKAATL PNGS
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
Arabidopsis Description
Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.