Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G40570.2 | Thale cress | nucleus | 32.88 | 34.6 |
| CDY64957 | Canola | cytosol | 33.78 | 26.41 |
| CDY01087 | Canola | cytosol | 34.23 | 24.52 |
| CDY00873 | Canola | cytosol | 31.08 | 21.17 |
| GSMUA_Achr11P... | Banana | nucleus | 27.48 | 20.47 |
| Bra006255.1-P | Field mustard | nucleus | 25.23 | 20.36 |
| Bra023466.1-P | Field mustard | nucleus | 25.68 | 19.45 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 24.32 | 18.37 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 22.97 | 18.28 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 22.97 | 18.09 |
| Bra014992.1-P | Field mustard | nucleus | 25.23 | 17.89 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 22.07 | 17.31 |
| Zm00001d025694_P001 | Maize | nucleus | 21.17 | 17.15 |
| KXG26564 | Sorghum | nucleus | 21.62 | 16.72 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 14.41 | 14.81 |
Protein Annotations
Description
AT5G40570 (E=5e-036) | surfeit locus protein 2 family protein / SURF2 family protein
Coordinates
chrA05:-:21409401..21412465
Molecular Weight (calculated)
24876.9 Da
IEP (calculated)
7.942
GRAVY (calculated)
-0.225
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MILKSKKPSG SPQLSGEPLT QPLNTSTKAN DVAFLGMKPL IQLHIGYIFF LDVRSHNLRR APAKDDDWRL LSVHTQTGTA EGFAKVSCFE NLLGSPTFVD
101: IRNGRLRCVE TGHEVVAGDE EAYARNKRCR LGLTDHALSH GKSPLTMFSQ CLISHSKFVC KLIEDTVNKN EEHIWKYVTS VQSSLFLEAA FASNDMQHLA
201: AMLRVLSELI PGFKETTEYY TF
101: IRNGRLRCVE TGHEVVAGDE EAYARNKRCR LGLTDHALSH GKSPLTMFSQ CLISHSKFVC KLIEDTVNKN EEHIWKYVTS VQSSLFLEAA FASNDMQHLA
201: AMLRVLSELI PGFKETTEYY TF
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
Arabidopsis Description
Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.