Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P21040_001 | Banana | nucleus | 59.06 | 59.86 |
| KXG26564 | Sorghum | nucleus | 46.64 | 48.43 |
| Zm00001d025694_P001 | Maize | nucleus | 43.96 | 47.81 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 33.56 | 46.3 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 42.28 | 45.16 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 42.28 | 44.68 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 41.95 | 44.17 |
| Solyc02g093510.2.1 | Tomato | nucleus | 38.93 | 44.11 |
| PGSC0003DMT400032840 | Potato | nucleus | 37.92 | 42.8 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 38.59 | 42.12 |
| CDX78578 | Canola | nucleus | 35.57 | 39.11 |
| KRH07108 | Soybean | nucleus | 37.25 | 39.08 |
| KRH06355 | Soybean | nucleus | 37.25 | 39.08 |
| AT5G14440.1 | Thale cress | nucleus | 37.92 | 38.7 |
| CDX91061 | Canola | nucleus | 37.58 | 38.62 |
| Bra006255.1-P | Field mustard | nucleus | 35.57 | 38.55 |
| AT5G40570.2 | Thale cress | nucleus | 27.18 | 38.39 |
| CDY70251 | Canola | nucleus | 37.25 | 38.14 |
| CDX70566 | Canola | nucleus | 35.91 | 37.94 |
| Bra023466.1-P | Field mustard | nucleus | 37.25 | 37.88 |
| CDX77338 | Canola | nucleus | 10.07 | 31.91 |
| Bra034786.1-P | Field mustard | plastid | 20.47 | 27.48 |
| CDY64957 | Canola | cytosol | 21.81 | 22.89 |
| CDY00873 | Canola | cytosol | 21.48 | 19.63 |
| CDY01087 | Canola | cytosol | 19.8 | 19.03 |
| CDY24130 | Canola | cytosol | 21.14 | 18.16 |
| CDX99929 | Canola | nucleus | 25.84 | 18.03 |
| Bra014992.1-P | Field mustard | nucleus | 16.44 | 15.65 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P12810_001 | EnsemblPlants:GSMUA_Achr11T12810_001 | EnsemblPlantsGene:GSMUA_Achr11G12810_001 | InterPro:Surf2 | ncoils:Coil | PANTHER:PTHR32175 |
| PANTHER:PTHR32175:SF2 | PFAM:PF05477 | SEG:seg | UniParc:UPI000296A737 | UniProt:M0RRR1 | MapMan:35.2 |
Description
surfeit locus protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G12810_001]
Coordinates
chr11:-:12052822..12056445
Molecular Weight (calculated)
32758.3 Da
IEP (calculated)
10.036
GRAVY (calculated)
-1.173
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRGGKVKG GGGEGTVLAQ NPTSNEEAEH SNGLSRKKKS KAKDGGGKGN GEKEKVEKEG AFLLGEPTFL DLGNGRLRCV ETGHELLAKD REAYGRTKAC
101: RLALIDAAVA RKKPPLNMFQ PHPTSKSQLV CKLTGDAVNK SEEHIWKHVS GKKFQNMLEQ KEMESHANAE AVEKNAKQSK KQFKSKKDQK KNAHESDSLT
201: KKTKANSDDI IEPDFWVPPV GSRWDFDDGE DRWDSHENSD DDADGGTGLD GTSEKDDPET RKLAKRSKRT SKSVGLSSFV SRKKKIKKAT TSPSEQQL
101: RLALIDAAVA RKKPPLNMFQ PHPTSKSQLV CKLTGDAVNK SEEHIWKHVS GKKFQNMLEQ KEMESHANAE AVEKNAKQSK KQFKSKKDQK KNAHESDSLT
201: KKTKANSDDI IEPDFWVPPV GSRWDFDDGE DRWDSHENSD DDADGGTGLD GTSEKDDPET RKLAKRSKRT SKSVGLSSFV SRKKKIKKAT TSPSEQQL
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
Arabidopsis Description
Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.