CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64957	Canola	cytosol	62.54	76.41
CDY00873	Canola	cytosol	70.03	74.54
CDY01087	Canola	cytosol	61.67	69.03
Bra014992.1-P	Field mustard	nucleus	60.23	66.77
CDX99929	Canola	nucleus	76.08	61.83
AT5G40570.2	Thale cress	nucleus	26.51	43.6
HORVU2Hr1G082940.1	Barley	nucleus	16.71	26.85
CDX91061	Canola	nucleus	19.6	23.45
CDY70251	Canola	nucleus	19.6	23.37
CDX78578	Canola	nucleus	17.87	22.88
CDX70566	Canola	nucleus	18.44	22.7
TraesCS2B01G356700.2	Wheat	nucleus	18.44	22.7
TraesCS2D01G337500.1	Wheat	nucleus	18.16	22.58
TraesCS2A01G325200.1	Wheat	nucleus	18.16	22.26
GSMUA_Achr2P21040_001	Banana	nucleus	18.16	21.43
GSMUA_Achr11P...	Banana	nucleus	18.16	21.14
KXG26564	Sorghum	nucleus	17.29	20.91
Zm00001d025694_P001	Maize	nucleus	16.43	20.8
CDX77338	Canola	nucleus	3.46	12.77

Protein Annotations

KEGG:00051+2.4.1.-	KEGG:00512+2.4.1.-	KEGG:00513+2.4.1.-	KEGG:00514+2.4.1.-	KEGG:00522+2.4.1.-	KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-	KEGG:00550+2.4.1.-	KEGG:00561+2.4.1.-	KEGG:00563+2.4.1.-	KEGG:00600+2.4.1.-	KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-	KEGG:00604+2.4.1.-	KEGG:00906+2.4.1.-	KEGG:00908+2.4.1.-	KEGG:00941+2.4.1.-	KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-	KEGG:00945+2.4.1.-	KEGG:00965+2.4.1.-	MapMan:35.1	GO:A0A078GCC3	UniProt:A0A078GCC3
EnsemblPlants:CDY24130	ProteinID:CDY24130	ProteinID:CDY24130.1	ncoils:Coil	InterPro:GAUT	GO:GO:0000139
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0016740	GO:GO:0016757	GO:GO:0045489	GO:GO:0047262
GO:GO:0071555	EnsemblPlantsGene:GSBRNA2T00024687001	InterPro:Glyco_trans_8	PFAM:PF01501	PFAM:PF05477	PANTHER:PTHR32116
PANTHER:PTHR32116:SF27	InterPro:Surf2	UniPathway:UPA00845	UniParc:UPI0004EE7ADA	SEG:seg	:

Description

BnaC03g57470DHexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078GCC3]

Coordinates

chrLK032154:+:13025..14674

Molecular Weight (calculated)

39753.9 Da

IEP (calculated)

8.993

GRAVY (calculated)

-0.353

Length

347 amino acids

Sequence
(BLAST)

001: MIGDCFRFIH RLEPQKSLLK CVETSHEVVA RDEEAYARNK RCRLGLIDHA LSHGKSSLTM FLQCQISRSK LVCKLIGDTV NKNDEHIWKY VNGKRFLHRL
101: EQVERGAGTS GKTEKIKVTN KHIRIKKETD SNDSEFWMLK SSSEYEELSE SAIMIMRLKA TIQSLEGQMS SVTEKSAKYA QIAAEEVPKS LYCLGGKLAE
201: RIYVAASKLT DNCLYHVCVF SDNIVATSVV VNSTALNSKA PEKVVFHLVT NAMKSWFAMN MDNLRGVTVD VQKFDDFNWL NASYVPVLKK LQDSDTQSYY
301: FSGHNDDGRT PIKFRNPKYL STLNHLNVQL YLFIRPYKLC YEDIKFL

Best Arabidopsis Sequence Match ( AT5G40570.1 )
(BLAST)

001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS

Arabidopsis Description

Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.