CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01087	Canola	cytosol	88.73	81.29
CDY00873	Canola	cytosol	80.28	69.94
CDY24130	Canola	cytosol	76.41	62.54
CDX99929	Canola	nucleus	71.83	47.78
AT5G40570.2	Thale cress	nucleus	31.34	42.18
Bra034786.1-P	Field mustard	plastid	26.41	33.78
HORVU2Hr1G082940.1	Barley	nucleus	21.13	27.78
CDX91061	Canola	nucleus	25.35	24.83
CDY70251	Canola	nucleus	25.0	24.4
GSMUA_Achr2P21040_001	Banana	nucleus	25.0	24.15
CDX70566	Canola	nucleus	23.94	24.11
CDX78578	Canola	nucleus	22.89	23.99
TraesCS2B01G356700.2	Wheat	nucleus	23.59	23.76
TraesCS2D01G337500.1	Wheat	nucleus	23.24	23.66
TraesCS2A01G325200.1	Wheat	nucleus	23.24	23.32
KXG26564	Sorghum	nucleus	23.24	23.0
Zm00001d025694_P001	Maize	nucleus	21.83	22.63
GSMUA_Achr11P...	Banana	nucleus	22.89	21.81
CDX77338	Canola	nucleus	4.23	12.77

Protein Annotations

KEGG:00051+2.4.1.-	KEGG:00512+2.4.1.-	KEGG:00513+2.4.1.-	KEGG:00514+2.4.1.-	KEGG:00522+2.4.1.-	KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-	KEGG:00550+2.4.1.-	KEGG:00561+2.4.1.-	KEGG:00563+2.4.1.-	KEGG:00600+2.4.1.-	KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-	KEGG:00604+2.4.1.-	KEGG:00906+2.4.1.-	KEGG:00908+2.4.1.-	KEGG:00941+2.4.1.-	KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-	KEGG:00945+2.4.1.-	KEGG:00965+2.4.1.-	MapMan:35.1	GO:A0A078JHS1	UniProt:A0A078JHS1
EnsemblPlants:CDY64957	ProteinID:CDY64957	ProteinID:CDY64957.1	InterPro:GAUT	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0047262	EnsemblPlantsGene:GSBRNA2T00043914001	PFAM:PF05477	PANTHER:PTHR32116	PANTHER:PTHR32116:SF27
InterPro:Surf2	UniPathway:UPA00845	UniParc:UPI0004EF23E5	:	:	:

Description

BnaAnng19820DBnaAnng19820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHS1]

Coordinates

chrLK034609:-:7416..8886

Molecular Weight (calculated)

32094.7 Da

IEP (calculated)

9.492

GRAVY (calculated)

-0.275

Length

284 amino acids

Sequence
(BLAST)

001: MIGDCFRFIH RLEPQKSLLT CVETVHEVVA GDEEAYARNK RCRLGLIDHA LSHGKSPLTM FSQCLISRSK LVCKLIGDTV NKNEEHIWKY VNGKRFLHRL
101: EQVERGAGTS GKTEKIQSFG CLSQVLVQSQ SRRVTKKTAK NKEDVNRDWT KYDHYGSATM IMRLKATIHS LEGQMSSVIE KSAKYAQIAA EEGKLAERIY
201: VVASKLTDNS LYHVCVFSDN IVATSVVVNS TALNSKAPEK VVFHLVTNAM KSWFAMNMDN LRGVTVEVQK FEDFKWLNAS YVPV

Best Arabidopsis Sequence Match ( AT5G40570.1 )
(BLAST)

001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS

Arabidopsis Description

Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.