Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G325200.1 | Wheat | nucleus | 96.81 | 96.47 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 95.39 | 96.42 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 71.28 | 93.06 |
| Zm00001d025694_P001 | Maize | nucleus | 67.02 | 68.98 |
| KXG26564 | Sorghum | nucleus | 69.86 | 68.64 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 42.91 | 44.32 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 45.39 | 43.54 |
| GSMUA_Achr11P... | Banana | nucleus | 44.68 | 42.28 |
| PGSC0003DMT400032840 | Potato | nucleus | 39.01 | 41.67 |
| Solyc02g093510.2.1 | Tomato | nucleus | 37.59 | 40.3 |
| KRH06355 | Soybean | nucleus | 40.43 | 40.14 |
| KRH07108 | Soybean | nucleus | 40.43 | 40.14 |
| CDX91061 | Canola | nucleus | 39.01 | 37.93 |
| CDX78578 | Canola | nucleus | 35.82 | 37.27 |
| CDY70251 | Canola | nucleus | 38.3 | 37.11 |
| Bra023466.1-P | Field mustard | nucleus | 38.3 | 36.86 |
| Bra006255.1-P | Field mustard | nucleus | 35.82 | 36.73 |
| CDX70566 | Canola | nucleus | 36.52 | 36.52 |
| AT5G14440.1 | Thale cress | nucleus | 37.23 | 35.96 |
| AT5G40570.2 | Thale cress | nucleus | 26.6 | 35.55 |
| CDX77338 | Canola | nucleus | 9.57 | 28.72 |
| CDY64957 | Canola | cytosol | 23.76 | 23.59 |
| Bra034786.1-P | Field mustard | plastid | 18.09 | 22.97 |
| CDY00873 | Canola | cytosol | 23.05 | 19.94 |
| CDY01087 | Canola | cytosol | 20.92 | 19.03 |
| CDY24130 | Canola | cytosol | 22.7 | 18.44 |
| CDX99929 | Canola | nucleus | 27.66 | 18.27 |
| Bra014992.1-P | Field mustard | nucleus | 16.67 | 15.02 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G356700.2 | EnsemblPlantsGene:TraesCS2B01G356700 | InterPro:Surf2 | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | PFAM:PF05477 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:508957611..508960579
Molecular Weight (calculated)
30946.6 Da
IEP (calculated)
5.561
GRAVY (calculated)
-1.216
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKGKAAAA AASASDSGAS SPQGSVEGGG EKEGSFLLGQ PTWEDAGGGR WRCAETGHEL PEREKDAYAR SRACRLALID HGVAHKKPPL NAFKPHPEHK
101: SKLVCNITGD TINKSEEHIW KHVNGKRFLN KLEKLEEKMA SGETGKVEGE QSNEVAKKSK SAKKKDKKKE KKEKKKAVVV NPSLPREPEP EIDDSDDSEF
201: WVPPVGSRWD DDDGKDRWES SPGKDDIAED EGASDDEDDD EMADKDDEVS EELASSRTKR LSVEAVGPSS FATRKKKPRK DE
101: SKLVCNITGD TINKSEEHIW KHVNGKRFLN KLEKLEEKMA SGETGKVEGE QSNEVAKKSK SAKKKDKKKE KKEKKKAVVV NPSLPREPEP EIDDSDDSEF
201: WVPPVGSRWD DDDGKDRWES SPGKDDIAED EGASDDEDDD EMADKDDEVS EELASSRTKR LSVEAVGPSS FATRKKKPRK DE
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
Arabidopsis Description
Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.