Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g093510.2.1 | Tomato | nucleus | 89.02 | 89.35 |
| KRH06355 | Soybean | nucleus | 56.44 | 52.46 |
| KRH07108 | Soybean | nucleus | 56.06 | 52.11 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 50.76 | 49.08 |
| AT5G14440.1 | Thale cress | nucleus | 49.62 | 44.86 |
| Bra006255.1-P | Field mustard | nucleus | 46.59 | 44.73 |
| CDX70566 | Canola | nucleus | 47.73 | 44.68 |
| CDX78578 | Canola | nucleus | 45.45 | 44.28 |
| CDX91061 | Canola | nucleus | 48.11 | 43.79 |
| Bra023466.1-P | Field mustard | nucleus | 47.73 | 43.0 |
| CDY70251 | Canola | nucleus | 47.35 | 42.96 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 34.47 | 42.13 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 41.67 | 39.43 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 41.67 | 39.01 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 41.67 | 38.87 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 43.18 | 38.78 |
| GSMUA_Achr11P... | Banana | nucleus | 42.8 | 37.92 |
| KXG26564 | Sorghum | nucleus | 40.53 | 37.28 |
| CDX77338 | Canola | nucleus | 13.26 | 37.23 |
| Zm00001d025694_P001 | Maize | nucleus | 36.36 | 35.04 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400032840 | EnsemblPlantsGene:PGSC0003DMG400012612 | EntrezGene:102585311 | InterPro:Surf2 | ncoils:Coil | PANTHER:PTHR32175 |
| PANTHER:PTHR32175:SF2 | PFAM:PF05477 | PGSC:PGSC0003DMG400012612 | RefSeq:XP_006338633.1 | SEG:seg | UniParc:UPI0002951329 |
| UniProt:M1AY60 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400012612]
Coordinates
chr2:+:47537292..47540976
Molecular Weight (calculated)
29358.1 Da
IEP (calculated)
7.202
GRAVY (calculated)
-1.270
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKASGVGE EGDGSTGKEG YKLLGNPTFK KLENGRFKCV QTGHELPEHA RDSYAHSKHC RLGLIDAALS KNKPPLNMFN QDPLNRSKLI CKLTGDTVNK
101: SEEHIWKHMS GKRFLRMLEK KETETEMENG GLEKQVENGV AKKTDSKANR RDKKKNKKKE IEDASKVISE IRDSSGKNSG SEDDDEFWMP PVGARWDNDD
201: GGDRWGSGSE SEEEEEEDAI GQDGGTEEDN HDAGELSKRA KRMSLEIGPS SFASRKKKKK TSAT
101: SEEHIWKHMS GKRFLRMLEK KETETEMENG GLEKQVENGV AKKTDSKANR RDKKKNKKKE IEDASKVISE IRDSSGKNSG SEDDDEFWMP PVGARWDNDD
201: GGDRWGSGSE SEEEEEEDAI GQDGGTEEDN HDAGELSKRA KRMSLEIGPS SFASRKKKKK TSAT
001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
Arabidopsis Description
At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.