Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G325200.1 | Wheat | nucleus | 96.77 | 95.41 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 96.42 | 95.39 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 72.4 | 93.52 |
| KXG26564 | Sorghum | nucleus | 69.18 | 67.25 |
| Zm00001d025694_P001 | Maize | nucleus | 65.59 | 66.79 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 43.37 | 44.32 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 45.16 | 42.86 |
| GSMUA_Achr11P... | Banana | nucleus | 45.16 | 42.28 |
| PGSC0003DMT400032840 | Potato | nucleus | 39.43 | 41.67 |
| Solyc02g093510.2.1 | Tomato | nucleus | 38.35 | 40.68 |
| KRH06355 | Soybean | nucleus | 41.22 | 40.49 |
| KRH07108 | Soybean | nucleus | 41.22 | 40.49 |
| CDX91061 | Canola | nucleus | 39.43 | 37.93 |
| CDX78578 | Canola | nucleus | 36.2 | 37.27 |
| CDY70251 | Canola | nucleus | 38.71 | 37.11 |
| Bra023466.1-P | Field mustard | nucleus | 38.71 | 36.86 |
| Bra006255.1-P | Field mustard | nucleus | 36.2 | 36.73 |
| CDX70566 | Canola | nucleus | 36.92 | 36.52 |
| AT5G14440.1 | Thale cress | nucleus | 37.63 | 35.96 |
| AT5G40570.2 | Thale cress | nucleus | 26.52 | 35.07 |
| CDX77338 | Canola | nucleus | 9.68 | 28.72 |
| CDY64957 | Canola | cytosol | 23.66 | 23.24 |
| Bra034786.1-P | Field mustard | plastid | 18.28 | 22.97 |
| CDY00873 | Canola | cytosol | 23.3 | 19.94 |
| CDY01087 | Canola | cytosol | 20.79 | 18.71 |
| CDY24130 | Canola | cytosol | 22.58 | 18.16 |
| CDX99929 | Canola | nucleus | 27.24 | 17.8 |
| Bra014992.1-P | Field mustard | nucleus | 16.85 | 15.02 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G337500.1 | EnsemblPlantsGene:TraesCS2D01G337500 | InterPro:Surf2 | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | PFAM:PF05477 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:430623556..430627037
Molecular Weight (calculated)
30705.3 Da
IEP (calculated)
5.561
GRAVY (calculated)
-1.265
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKGKAAAA ASDSGASSPQ GSVEGGGEKE GSFLLGQPTW EDAGGGRWRC AETGHELPER EKDAYARSRA CRLALIDHGV AHKKPPLNAF KPHPEHKSKL
101: ICNITGDTIN KSEEHIWKHV NGKRFLNKLE KLEEKMASGE TGKVEGEQSN EVAKKSKSTK KKDKKKEKKE KKKAAVANPS LPREPEPEID DSDDSEFWVP
201: PVGSRWDDDD GKDRWESSPG KDDIAEDEGA SDDEDDDEMA DKDDEVSEEL ASSRTKRLSV EAVGPSSFAT RKKKPRKDE
101: ICNITGDTIN KSEEHIWKHV NGKRFLNKLE KLEEKMASGE TGKVEGEQSN EVAKKSKSTK KKDKKKEKKE KKKAAVANPS LPREPEPEID DSDDSEFWVP
201: PVGSRWDDDD GKDRWESSPG KDDIAEDEGA SDDEDDDEMA DKDDEVSEEL ASSRTKRLSV EAVGPSSFAT RKKKPRKDE
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
Arabidopsis Description
Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.