Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034786.1-P | Field mustard | plastid | 34.6 | 32.88 |
| CDX99929 | Canola | nucleus | 63.98 | 31.62 |
| CDY64957 | Canola | cytosol | 42.18 | 31.34 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 41.23 | 29.59 |
| Bra014992.1-P | Field mustard | nucleus | 42.65 | 28.75 |
| Zm00001d025694_P001 | Maize | nucleus | 36.49 | 28.1 |
| GSMUA_Achr11P... | Banana | nucleus | 38.39 | 27.18 |
| KXG26564 | Sorghum | nucleus | 36.49 | 26.83 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 35.55 | 26.6 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 35.07 | 26.52 |
| CDY24130 | Canola | cytosol | 43.6 | 26.51 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 27.01 | 26.39 |
| AT5G14440.1 | Thale cress | nucleus | 36.49 | 26.37 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 35.07 | 26.15 |
| CDY00873 | Canola | cytosol | 39.81 | 25.77 |
| CDY01087 | Canola | cytosol | 37.44 | 25.48 |
Protein Annotations
| ArrayExpress:AT5G40570 | EnsemblPlants:AT5G40570.2 | EnsemblPlantsGene:AT5G40570 | EntrezGene:834055 | GO:GO:0008150 | InterPro:Surf2 |
| PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | PFAM:PF05477 | PO:PO:0000293 | ProteinID:AED94566.1 | RefSeq:AT5G40570 |
| RefSeq:AT5G40570-TAIR-G | RefSeq:NP_001078686.1 | SEG:seg | TAIR:AT5G40570 | TAIR:AT5G40570.2 | Unigene:At.66685 |
| UniParc:UPI0001505610 | UniProt:A8MRG2 | MapMan:35.2 | : | : | : |
Description
Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
Coordinates
chr5:+:16246786..16248390
Molecular Weight (calculated)
23717.7 Da
IEP (calculated)
6.868
GRAVY (calculated)
-1.024
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRIENGL KFSKLVCKLT GDTVNKNEEH
101: IWKHVNGKRF LHKLEQVERG AGSSGRTEET QVNNPRHNKE DSGSEESDFW MPKSSSDSEL DEETDEENCK GSHCDDKESE ELSERTKRMS LEIGPSSFAS
201: RKKKSKNDEL S
101: IWKHVNGKRF LHKLEQVERG AGSSGRTEET QVNNPRHNKE DSGSEESDFW MPKSSSDSEL DEETDEENCK GSHCDDKESE ELSERTKRMS LEIGPSSFAS
201: RKKKSKNDEL S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.