Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025694_P001 | Maize | nucleus | 83.97 | 87.96 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 68.64 | 69.86 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 67.25 | 69.18 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 67.94 | 68.9 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 50.52 | 67.13 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 48.08 | 46.94 |
| GSMUA_Achr11P... | Banana | nucleus | 48.43 | 46.64 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 40.77 | 42.86 |
| KRH07108 | Soybean | nucleus | 41.81 | 42.25 |
| Solyc02g093510.2.1 | Tomato | nucleus | 38.68 | 42.21 |
| PGSC0003DMT400032840 | Potato | nucleus | 37.28 | 40.53 |
| KRH06355 | Soybean | nucleus | 40.07 | 40.49 |
| AT5G40570.2 | Thale cress | nucleus | 26.83 | 36.49 |
| CDX70566 | Canola | nucleus | 35.54 | 36.17 |
| CDX78578 | Canola | nucleus | 34.15 | 36.16 |
| Bra006255.1-P | Field mustard | nucleus | 34.49 | 36.0 |
| CDY70251 | Canola | nucleus | 35.19 | 34.71 |
| CDX91061 | Canola | nucleus | 34.84 | 34.48 |
| Bra023466.1-P | Field mustard | nucleus | 35.19 | 34.47 |
| AT5G14440.1 | Thale cress | nucleus | 34.84 | 34.25 |
| CDX77338 | Canola | nucleus | 9.06 | 27.66 |
| CDY64957 | Canola | cytosol | 23.0 | 23.24 |
| Bra034786.1-P | Field mustard | plastid | 16.72 | 21.62 |
| CDY00873 | Canola | cytosol | 22.65 | 19.94 |
| CDY01087 | Canola | cytosol | 20.56 | 19.03 |
| CDY24130 | Canola | cytosol | 20.91 | 17.29 |
| CDX99929 | Canola | nucleus | 25.09 | 16.86 |
| Bra014992.1-P | Field mustard | nucleus | 16.03 | 14.7 |
Protein Annotations
| EnsemblPlants:KXG26564 | EnsemblPlantsGene:SORBI_3006G121400 | InterPro:Surf2 | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | PFAM:PF05477 |
| ProteinID:KXG26564 | ProteinID:KXG26564.1 | SEG:seg | UniParc:UPI0001C805FF | UniProt:A0A1B6PLL7 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr6:+:48792420..48794798
Molecular Weight (calculated)
31089.8 Da
IEP (calculated)
6.891
GRAVY (calculated)
-1.218
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKSKGPAA AAPAAADETG VSSPQGSAHG SEGGGEKEGA FLLGEPTWED TGGGRWRCAE TGHELPEREK EAYARSRACR LALIDHAVAR KKPPLNAFKP
101: HPEHKSKLVC KITGDTVNKL EDHIWKHING KRFLNKLEKL EDQVASGEMA DEEPVKSNEV AKKSKSRKKD KKKANVASPS LPREPKPEMD DSDDPDFWVP
201: PVGSRWDDDD GKDRWESSPG KPNSAKNKGG SDDDGAGDND GGGDDDTADK DDAESRELAS SRTKRMSIEA VGPSSFASRK KKPKKEQ
101: HPEHKSKLVC KITGDTVNKL EDHIWKHING KRFLNKLEKL EDQVASGEMA DEEPVKSNEV AKKSKSRKKD KKKANVASPS LPREPKPEMD DSDDPDFWVP
201: PVGSRWDDDD GKDRWESSPG KPNSAKNKGG SDDDGAGDND GGGDDDTADK DDAESRELAS SRTKRMSIEA VGPSSFASRK KKPKKEQ
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
Arabidopsis Description
Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.