Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78578 | Canola | nucleus | 93.82 | 95.2 |
| Bra023466.1-P | Field mustard | nucleus | 74.55 | 69.97 |
| AT5G14440.1 | Thale cress | nucleus | 72.36 | 68.15 |
| PGSC0003DMT400032840 | Potato | nucleus | 44.73 | 46.59 |
| Solyc02g093510.2.1 | Tomato | nucleus | 43.27 | 45.25 |
| KRH06355 | Soybean | nucleus | 46.55 | 45.07 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 44.36 | 44.69 |
| KRH07108 | Soybean | nucleus | 45.45 | 44.01 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 30.18 | 38.43 |
| Zm00001d025694_P001 | Maize | nucleus | 36.73 | 36.86 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 36.73 | 36.2 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 36.73 | 35.82 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 36.73 | 35.69 |
| GSMUA_Achr11P... | Banana | nucleus | 38.55 | 35.57 |
| KXG26564 | Sorghum | nucleus | 36.0 | 34.49 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 36.73 | 34.35 |
| Bra034786.1-P | Field mustard | plastid | 20.36 | 25.23 |
| Bra014992.1-P | Field mustard | nucleus | 18.18 | 15.97 |
Protein Annotations
Description
AT5G14440 (E=1e-060) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: surfeit locus protein 2 family protein / SURF2 family protein (TAIR:AT5G40570.1); Has 6533 Blast hits to 4299 proteins in 259 species: Archae - 4; Bacteria - 127; Metazoa - 2727; Fungi - 698; Plants - 260; Viruses - 77; Other Eukaryotes - 2640 (source: NCBI BLink).
Coordinates
chrA03:-:2710484..2711854
Molecular Weight (calculated)
31455.4 Da
IEP (calculated)
4.776
GRAVY (calculated)
-1.401
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAGEETTT SVKEGANLLG KPKYKKIENG RFRCVQTGHE LLEKDKTVYS ESKRCRLGLI DHALSHSKPP LNLFEQDPSS RSKLKCKLTG DTVNKTEEHI
101: WKHINGRRFL NKLEEKEREK EFGAIPEEGG ETVVKENGVK EEKKKNKKKK KKNKKKNKKL DEKEENGEDV VMDEVEHEND EDVGEQEELD FWMPPDGERW
201: DFDDGGDRWG SDSEEEEEKN GEEDPIVGEM DEDGNSSLDD CILGEVDEDE TLESKKRKAE ELSSKKKKKI NTTAS
101: WKHINGRRFL NKLEEKEREK EFGAIPEEGG ETVVKENGVK EEKKKNKKKK KKNKKKNKKL DEKEENGEDV VMDEVEHEND EDVGEQEELD FWMPPDGERW
201: DFDDGGDRWG SDSEEEEEKN GEEDPIVGEM DEDGNSSLDD CILGEVDEDE TLESKKRKAE ELSSKKKKKI NTTAS
001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASNKRK HEELGSSDLP SKKKNKKKKK KKNVEATSSS Y
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASNKRK HEELGSSDLP SKKKNKKKKK KKNVEATSSS Y
Arabidopsis Description
At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.