Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- endoplasmic reticulum 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH07108 | Soybean | nucleus | 91.55 | 91.55 |
| PGSC0003DMT400032840 | Potato | nucleus | 52.46 | 56.44 |
| Solyc02g093510.2.1 | Tomato | nucleus | 51.41 | 55.51 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 49.3 | 51.28 |
| CDX91061 | Canola | nucleus | 47.54 | 46.55 |
| Bra006255.1-P | Field mustard | nucleus | 45.07 | 46.55 |
| CDX78578 | Canola | nucleus | 43.66 | 45.76 |
| CDX70566 | Canola | nucleus | 45.42 | 45.74 |
| Bra023466.1-P | Field mustard | nucleus | 46.83 | 45.39 |
| CDY70251 | Canola | nucleus | 46.48 | 45.36 |
| AT5G14440.1 | Thale cress | nucleus | 46.48 | 45.21 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 34.15 | 44.91 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 40.49 | 41.22 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 40.14 | 40.43 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 40.14 | 40.28 |
| KXG26564 | Sorghum | nucleus | 40.49 | 40.07 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 40.49 | 39.12 |
| Zm00001d025694_P001 | Maize | nucleus | 37.32 | 38.69 |
| GSMUA_Achr11P... | Banana | nucleus | 39.08 | 37.25 |
| CDX77338 | Canola | nucleus | 11.97 | 36.17 |
Protein Annotations
| EMBL:ACUP02009827 | EnsemblPlants:KRH06355 | EnsemblPlantsGene:GLYMA_16G018100 | EntrezGene:100806918 | InterPro:Surf2 | ncoils:Coil |
| PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | PFAM:PF05477 | ProteinID:KRH06355 | ProteinID:KRH06355.1 | SEG:seg |
| UniParc:UPI000233AA80 | UniProt:I1MKC3 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:1612068..1614560
Molecular Weight (calculated)
32134.5 Da
IEP (calculated)
6.790
GRAVY (calculated)
-1.262
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTEETRKK EGSNLLGSPN FTELGNGRFK CLETGHEVLS KDIAFYSHSK KCRLGLIDFA LSNNKPPLNM FKQDPLCRSK LICKLTGDNV NKSEEHIWKH
101: MSGKRFLNKL EQEEEEKLLC HGLEGGESLH ESKSADGGKK DRMMKKKKNK KNKVKEIDEE KSQVSKSADG AKKDRMKKEN NKDKGIEEVI SEVRKSSNEN
201: SDTEEDFWMP PAGDRWDNDD GGDRWGSESE SEQGTEEGDV IDGDAAEDCK ESEELSSRTK RMSIEIGPSS FATRKKKSKK NYQT
101: MSGKRFLNKL EQEEEEKLLC HGLEGGESLH ESKSADGGKK DRMMKKKKNK KNKVKEIDEE KSQVSKSADG AKKDRMKKEN NKDKGIEEVI SEVRKSSNEN
201: SDTEEDFWMP PAGDRWDNDD GGDRWGSESE SEQGTEEGDV IDGDAAEDCK ESEELSSRTK RMSIEIGPSS FATRKKKSKK NYQT
001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
Arabidopsis Description
At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.