Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06355 | Soybean | nucleus | 91.55 | 91.55 |
| PGSC0003DMT400032840 | Potato | nucleus | 52.11 | 56.06 |
| Solyc02g093510.2.1 | Tomato | nucleus | 51.41 | 55.51 |
| VIT_14s0066g00260.t01 | Wine grape | nucleus | 47.54 | 49.45 |
| CDX91061 | Canola | nucleus | 46.83 | 45.86 |
| Bra006255.1-P | Field mustard | nucleus | 44.01 | 45.45 |
| HORVU2Hr1G082940.1 | Barley | nucleus | 34.51 | 45.37 |
| CDX70566 | Canola | nucleus | 44.72 | 45.04 |
| CDX78578 | Canola | nucleus | 42.96 | 45.02 |
| CDY70251 | Canola | nucleus | 46.13 | 45.02 |
| AT5G14440.1 | Thale cress | nucleus | 46.13 | 44.86 |
| Bra023466.1-P | Field mustard | nucleus | 46.13 | 44.71 |
| KXG26564 | Sorghum | nucleus | 42.25 | 41.81 |
| TraesCS2D01G337500.1 | Wheat | nucleus | 40.49 | 41.22 |
| TraesCS2A01G325200.1 | Wheat | nucleus | 40.49 | 40.64 |
| Zm00001d025694_P001 | Maize | nucleus | 39.08 | 40.51 |
| TraesCS2B01G356700.2 | Wheat | nucleus | 40.14 | 40.43 |
| GSMUA_Achr2P21040_001 | Banana | nucleus | 40.85 | 39.46 |
| GSMUA_Achr11P... | Banana | nucleus | 39.08 | 37.25 |
| CDX77338 | Canola | nucleus | 11.27 | 34.04 |
Protein Annotations
| EMBL:ACUP02009935 | EnsemblPlants:KRH07108 | EnsemblPlantsGene:GLYMA_16G068500 | EntrezGene:100804779 | InterPro:Surf2 | ncoils:Coil |
| PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | PFAM:PF05477 | ProteinID:KRH07108 | ProteinID:KRH07108.1 | SEG:seg |
| UniParc:UPI000233ABF5 | UniProt:I1MLS5 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:6803722..6806427
Molecular Weight (calculated)
32187.8 Da
IEP (calculated)
8.139
GRAVY (calculated)
-1.254
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNKRMATTG KKEGNNLLGL PNFTELGNGR FKCLETGHEV LSKDIASYSH SKKCRLGLID FALSNNKPPL NMFKQHPLCR SKLICKLTGD NVNKSEEHIW
101: KHMSGKRFLN KLEQEEEEKL LCHGLEGEES LHESKSADGG KKDRMKKKKK KKNRVKEIDE EKLQVSKSAD GAKKDRMKKE NNKDKGIEEV ISEVRKSSNE
201: NSDTEDEDFW MPPAGDRWDN DDGGDRWGSE SEQGTEEGDV IDGDAAEDCK ESDELSSRTK RMSIEIGPSS FATRKKKSKK NHQT
101: KHMSGKRFLN KLEQEEEEKL LCHGLEGEES LHESKSADGG KKDRMKKKKK KKNRVKEIDE EKLQVSKSAD GAKKDRMKKE NNKDKGIEEV ISEVRKSSNE
201: NSDTEDEDFW MPPAGDRWDN DDGGDRWGSE SEQGTEEGDV IDGDAAEDCK ESDELSSRTK RMSIEIGPSS FATRKKKSKK NHQT
001: MAATEEEVTT TKEGADLLGK PKYKKLENGR FKCVQTGHEL LEKDKKVYSQ SKRCRLGLID YALSHSKPPL NLFEQDPNAR SKLKCKLTGD TVNKTEEHIW
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
101: KHITGRRFLN RLEEKEREKE SGSIPAEGGE TPAKENGVED EDKKKKKKKN NKKKKNKKSV EKKKNGEDVA DEIEHENDEA VEEELEFWMP PDGERWDFDD
201: GRDRWGSDSD SDVEMNEETD PIGEFDEDGE ISMEESILIG EVDEDGKIVL DDTHASSNKR KHEELGSSDL PSKKKNKKKK KKKNVEATSS SY
Arabidopsis Description
At5g14440 [Source:UniProtKB/TrEMBL;Acc:Q6NPE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.