CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64957	Canola	cytosol	81.29	88.73
CDY00873	Canola	cytosol	74.52	70.86
CDY24130	Canola	cytosol	69.03	61.67
CDX99929	Canola	nucleus	65.48	47.54
AT5G40570.2	Thale cress	nucleus	25.48	37.44
Bra034786.1-P	Field mustard	plastid	24.52	34.23
HORVU2Hr1G082940.1	Barley	nucleus	16.13	23.15
CDX70566	Canola	nucleus	20.97	23.05
CDX91061	Canola	nucleus	21.29	22.76
CDY70251	Canola	nucleus	21.29	22.68
CDX78578	Canola	nucleus	19.68	22.51
GSMUA_Achr2P21040_001	Banana	nucleus	20.97	22.11
TraesCS2B01G356700.2	Wheat	nucleus	19.03	20.92
TraesCS2D01G337500.1	Wheat	nucleus	18.71	20.79
KXG26564	Sorghum	nucleus	19.03	20.56
TraesCS2A01G325200.1	Wheat	nucleus	18.71	20.49
Zm00001d025694_P001	Maize	nucleus	17.74	20.07
GSMUA_Achr11P...	Banana	nucleus	19.03	19.8
CDX77338	Canola	nucleus	3.87	12.77

Protein Annotations

KEGG:00051+2.4.1.-	KEGG:00512+2.4.1.-	KEGG:00513+2.4.1.-	KEGG:00514+2.4.1.-	KEGG:00522+2.4.1.-	KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-	KEGG:00550+2.4.1.-	KEGG:00561+2.4.1.-	KEGG:00563+2.4.1.-	KEGG:00600+2.4.1.-	KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-	KEGG:00604+2.4.1.-	KEGG:00906+2.4.1.-	KEGG:00908+2.4.1.-	KEGG:00941+2.4.1.-	KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-	KEGG:00945+2.4.1.-	KEGG:00965+2.4.1.-	MapMan:35.1	GO:A0A078EIX5	EnsemblPlants:CDY01087
ProteinID:CDY01087	ProteinID:CDY01087.1	ncoils:Coil	InterPro:GAUT	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0016757	GO:GO:0045489	GO:GO:0047262	GO:GO:0071555	EnsemblPlantsGene:GSBRNA2T00111134001
InterPro:Glyco_trans_8	PFAM:PF01501	PFAM:PF05477	PANTHER:PTHR32116	PANTHER:PTHR32116:SF27	InterPro:Surf2
UniPathway:UPA00845	UniParc:UPI0004EF0D67	:	:	:	:

Description

BnaC05g41130D

Coordinates

chrLK031923:+:1095194..1096685

Molecular Weight (calculated)

34995.4 Da

IEP (calculated)

8.864

GRAVY (calculated)

-0.174

Length

310 amino acids

Sequence
(BLAST)

001: MIGDCFRFIH RLEPQNGLLK CVETGHEVVV GDEEAYARNK RCRLGLIDHA LSHGKSPLTM FLQCLISHSK FVCKLIGDTV NKNEEHIWKY QVERGAGTSG
101: KTEKIQSFGC LSQVLVQSQS RRVMKKTAKV LIVMPKNMRS SQKVVLSLLQ NKEDVNRDWT KYDHYGSTTM IMRLKATIQS LEGQMSSVTE KSAKYAQIAA
201: EEVPKSLYCL GELAERIYVV AFKLTDNSLY HVCVFSDNIV ATSVVVNSTA LNSKAPEKFV FHLVTNAIKS WFAMNVDNLG VTVEVQKFED FKWLNASYVP
301: VLKQLQDSDT

Best Arabidopsis Sequence Match ( AT2G20810.1 )
(BLAST)

001: MRRRGGDSFR RAGRRKISNV VWWVLSGIAL LLFFLILSKA GHIEPRPSIP KRRYRNDKFV EGMNMTEEML SPTSVARQVN DQIALAKAFV VIAKESKNLQ
101: FAWDLSAQIR NSQLLLSSAA TRRSPLTVLE SESTIRDMAV LLYQAQQLHY DSATMIMRLK ASIQALEEQM SSVSEKSSKY GQIAAEEVPK SLYCLGVRLT
201: TEWFQNLDLQ RTLKERSRVD SKLTDNSLYH FCVFSDNIIA TSVVVNSTAL NSKAPEKVVF HLVTNEINYA AMKAWFAINM DNLRGVTVEV QKFEDFSWLN
301: ASYVPVLKQL QDSDTQSYYF SGHNDDGRTP IKFRNPKYLS MLNHLRFYIP EVFPALKKVV FLDDDVVVQK DLSSLFSIDL NKNVNGAVET CMETFHRYHK
401: YLNYSHPLIR SHFDPDACGW AFGMNVFDLV EWRKRNVTGI YHYWQEKNVD RTLWKLGTLP PGLLTFYGLT EALEASWHIL GLGYTNVDAR VIEKGAVLHF
501: NGNLKPWLKI GIEKYKPLWE RYVDYTSPFM QQCNFH

Arabidopsis Description

GAUT10Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PV18]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.