Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36868 | Canola | nucleus | 50.5 | 87.83 |
| CDY29764 | Canola | nucleus | 90.0 | 81.26 |
| CDY50683 | Canola | cytosol, endoplasmic reticulum, nucleus | 89.5 | 76.99 |
| AT4G14740.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 91.0 | 76.63 |
| GSMUA_Achr4P21170_001 | Banana | cytosol | 59.5 | 64.85 |
| VIT_05s0020g04020.t01 | Wine grape | nucleus | 70.0 | 60.74 |
| KRG91356 | Soybean | cytosol | 72.0 | 60.5 |
| KRH35470 | Soybean | nucleus | 71.0 | 59.66 |
| CDY46598 | Canola | mitochondrion | 71.5 | 59.21 |
| PGSC0003DMT400016521 | Potato | nucleus | 68.5 | 58.8 |
| Solyc09g082580.2.1 | Tomato | cytosol | 67.75 | 58.28 |
| KRH69115 | Soybean | nucleus | 70.25 | 57.82 |
| KRH31661 | Soybean | nucleus | 69.75 | 57.76 |
| Os03t0635800-01 | Rice | nucleus | 54.0 | 57.14 |
| GSMUA_Achr5P02990_001 | Banana | nucleus | 62.75 | 55.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 62.0 | 54.63 |
| CDY22328 | Canola | plastid | 60.75 | 53.88 |
| GSMUA_Achr7P07730_001 | Banana | nucleus | 59.5 | 53.48 |
| CDX94730 | Canola | cytosol | 59.75 | 53.23 |
| CDY14898 | Canola | cytosol | 59.5 | 52.77 |
| Os12t0604200-00 | Rice | nucleus | 47.75 | 51.48 |
| TraesCS5A01G377600.1 | Wheat | nucleus | 59.0 | 51.42 |
| TraesCS5B01G381200.1 | Wheat | nucleus | 59.5 | 51.29 |
| TraesCS5D01G387600.1 | Wheat | nucleus | 59.25 | 51.19 |
| HORVU5Hr1G093460.2 | Barley | nucleus | 59.25 | 51.08 |
| Zm00001d033283_P001 | Maize | cytosol | 59.0 | 50.0 |
| KXG37970 | Sorghum | cytosol | 58.5 | 49.68 |
| CDY36869 | Canola | nucleus, plastid | 21.5 | 49.43 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 57.25 | 48.83 |
| CDX93914 | Canola | nucleus | 59.75 | 48.68 |
| CDY53717 | Canola | nucleus | 59.5 | 48.47 |
| TraesCS5A01G056700.2 | Wheat | nucleus | 56.5 | 47.98 |
| TraesCS5B01G060100.2 | Wheat | nucleus | 56.25 | 47.97 |
| CDX96925 | Canola | plastid | 58.75 | 47.96 |
| OQU79534 | Sorghum | cytosol, mitochondrion, nucleus | 58.5 | 47.95 |
| TraesCS5D01G067900.2 | Wheat | nucleus | 56.25 | 47.87 |
| Zm00001d030661_P001 | Maize | cytosol | 54.5 | 47.19 |
| CDX68890 | Canola | cytosol | 32.5 | 30.45 |
| CDX75286 | Canola | cytosol | 32.5 | 30.45 |
| CDY32269 | Canola | cytosol | 26.5 | 28.04 |
| CDY65120 | Canola | cytosol | 27.5 | 27.3 |
| CDY09634 | Canola | nucleus | 27.75 | 27.14 |
| CDY64500 | Canola | cytosol | 27.25 | 27.05 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 25.75 | 25.06 |
| CDY40515 | Canola | cytosol | 27.25 | 24.83 |
| CDY02766 | Canola | cytosol | 25.5 | 24.64 |
| CDY51283 | Canola | cytosol | 25.25 | 24.63 |
| CDX77767 | Canola | nucleus | 24.75 | 24.38 |
| CDY59298 | Canola | nucleus | 24.5 | 24.14 |
| GSMUA_Achr4P21160_001 | Banana | cytosol | 1.75 | 7.22 |
Protein Annotations
| EnsemblPlants:CDY16256 | EnsemblPlantsGene:GSBRNA2T00090723001 | GO:A0A078FT33 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF828 | InterPro:PH_pln | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF16 | PFAM:PF05703 | PFAM:PF08458 |
| ProteinID:CDY16256 | ProteinID:CDY16256.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDE644 | UniProt:A0A078FT33 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC01g22910DBnaC01g22910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT33]
Coordinates
chrLK032062:-:8136..10721
Molecular Weight (calculated)
42627.2 Da
IEP (calculated)
6.939
GRAVY (calculated)
-0.316
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MERPMVPTWR PDPVYRPPET PLEPMEFLAR SWSVSALEVS KALTPSNPQI LLSKTEEETI SGDGGDTEEN GLVSGNTFSF ACSETSQMVM DRILSHSQEV
101: SPRTSGRLSH SSGPLNGSLT DSPPVSPPES DDIKQFCRAN NTALNNINSQ FRSTATTPGP ITATATQSKT VGRWLKDRRE KKKEETRAHN AQIHAAVSVA
201: GVAAAVAAIA AATAAFSSSG KDEQMAKTDM AVASAATLVA AQCVEAAELM GAEREHLASV VSSAVNVRSA GDIMTLTAGA ATALRGVATL KARAMKEVWN
301: IASVIPMDKG LTSTGGCSNV HNGSNGSSSS SHSGELMQQE NFLGTCSREW LARGCELLKR TRKGDLHWKI VSVYINKMNQ VLVYFPYQGF KNEGGEGFGF
101: SPRTSGRLSH SSGPLNGSLT DSPPVSPPES DDIKQFCRAN NTALNNINSQ FRSTATTPGP ITATATQSKT VGRWLKDRRE KKKEETRAHN AQIHAAVSVA
201: GVAAAVAAIA AATAAFSSSG KDEQMAKTDM AVASAATLVA AQCVEAAELM GAEREHLASV VSSAVNVRSA GDIMTLTAGA ATALRGVATL KARAMKEVWN
301: IASVIPMDKG LTSTGGCSNV HNGSNGSSSS SHSGELMQQE NFLGTCSREW LARGCELLKR TRKGDLHWKI VSVYINKMNQ VLVYFPYQGF KNEGGEGFGF
001: MEKLMVPTWR PDPVYRPPET PLEPMEFLAR SWSVSALEVS KALTPPNPQI LLSKTEEEEE EEPISSVVDG DGDTEDTGLV TGNPFSFACS ETSQMVMDRI
101: LSHSQEVSPR TSGRLSHSSG PLNGSLTDSP PVSPPESDDI KQFCRANKNS LNSVNSQFRS TAATPGPITA TATQSKTVGR WLKDRREKKK EETRAHNAQI
201: HAAVSVAGVA AAVAAIAAAT AASSSCGKDE QMAKTDMAVA SAATLVAAQC VEAAEVMGAE REYLASVVSS AVNVRSAGDI MTLTAGAATA LRGVQTLKAR
301: AMKEVWNIAS VIPMDKGLTS TGGSSNNVNG SNGSSSSSHS GELVQQENFL GTCSREWLAR GCELLKRTRK GDLHWKIVSV YINKMNQVML KMKSRHVGGT
401: FTKKKKSK
101: LSHSQEVSPR TSGRLSHSSG PLNGSLTDSP PVSPPESDDI KQFCRANKNS LNSVNSQFRS TAATPGPITA TATQSKTVGR WLKDRREKKK EETRAHNAQI
201: HAAVSVAGVA AAVAAIAAAT AASSSCGKDE QMAKTDMAVA SAATLVAAQC VEAAEVMGAE REYLASVVSS AVNVRSAGDI MTLTAGAATA LRGVQTLKAR
301: AMKEVWNIAS VIPMDKGLTS TGGSSNNVNG SNGSSSSSHS GELVQQENFL GTCSREWLAR GCELLKRTRK GDLHWKIVSV YINKMNQVML KMKSRHVGGT
401: FTKKKKSK
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q8VY20]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.