Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59298 | Canola | nucleus | 94.58 | 94.58 |
| AT5G47440.1 | Thale cress | nucleus | 81.03 | 81.03 |
| CDY65120 | Canola | cytosol | 72.17 | 72.7 |
| CDY64500 | Canola | cytosol | 71.92 | 72.46 |
| CDY09634 | Canola | nucleus | 71.67 | 71.15 |
| KRH28119 | Soybean | nucleus | 49.51 | 51.41 |
| KRH04152 | Soybean | nucleus | 49.26 | 50.89 |
| PGSC0003DMT400012161 | Potato | nucleus | 47.78 | 49.74 |
| KRH57434 | Soybean | nucleus | 47.78 | 49.24 |
| Solyc08g078500.2.1 | Tomato | cytosol | 47.29 | 49.23 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 47.29 | 49.1 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 37.44 | 45.37 |
| GSMUA_Achr11P... | Banana | nucleus | 41.63 | 42.68 |
| TraesCS6A01G250400.1 | Wheat | cytosol | 40.39 | 42.6 |
| TraesCS6B01G275000.1 | Wheat | cytosol | 40.15 | 42.23 |
| HORVU0Hr1G032140.1 | Barley | cytosol | 40.15 | 41.79 |
| HORVU0Hr1G027000.1 | Barley | cytosol | 40.15 | 41.79 |
| TraesCS6D01G232200.2 | Wheat | cytosol | 40.15 | 41.79 |
| HORVU6Hr1G062990.1 | Barley | cytosol | 40.15 | 40.85 |
| Os10t0560000-01 | Rice | cytosol | 37.93 | 40.63 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 37.68 | 39.84 |
| Zm00001d000175_P001 | Maize | plastid | 38.42 | 39.29 |
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 36.95 | 39.06 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 36.7 | 38.9 |
| TraesCS4D01G363600.1 | Wheat | mitochondrion, nucleus | 37.44 | 38.38 |
| KXG31087 | Sorghum | nucleus | 40.15 | 38.17 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 35.96 | 37.92 |
| Zm00001d029886_P001 | Maize | vacuole | 36.95 | 37.88 |
| Zm00001d051361_P001 | Maize | plastid | 39.9 | 37.76 |
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 38.18 | 37.71 |
| TraesCS4B01G373700.1 | Wheat | nucleus | 36.95 | 37.31 |
| CDY40515 | Canola | cytosol | 40.15 | 37.13 |
| TraesCS5A01G540500.1 | Wheat | cytosol | 33.74 | 36.93 |
| TraesCS5A01G540300.1 | Wheat | extracellular | 36.7 | 36.52 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 37.19 | 36.39 |
| CDY32269 | Canola | cytosol | 32.27 | 34.66 |
| CDY36869 | Canola | nucleus, plastid | 12.07 | 28.16 |
| CDX68890 | Canola | cytosol | 29.31 | 27.87 |
| CDX75286 | Canola | cytosol | 29.31 | 27.87 |
| CDY29764 | Canola | nucleus | 30.3 | 27.77 |
| CDY22328 | Canola | plastid | 30.79 | 27.72 |
| CDX94730 | Canola | cytosol | 30.54 | 27.62 |
| CDY50683 | Canola | cytosol, endoplasmic reticulum, nucleus | 31.28 | 27.31 |
| CDY14898 | Canola | cytosol | 30.3 | 27.27 |
| CDY46598 | Canola | mitochondrion | 31.28 | 26.29 |
| CDX96925 | Canola | plastid | 30.3 | 25.1 |
| CDX93914 | Canola | nucleus | 30.05 | 24.85 |
| CDY16256 | Canola | cytosol | 24.38 | 24.75 |
| CDY53717 | Canola | nucleus | 29.8 | 24.64 |
| CDY02766 | Canola | cytosol | 23.89 | 23.43 |
| CDY51283 | Canola | cytosol | 23.65 | 23.41 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 23.15 | 22.87 |
| CDY36868 | Canola | nucleus | 11.33 | 20.0 |
Protein Annotations
Description
BnaC07g20210D
Coordinates
chrLK031812:-:1679189..1680793
Molecular Weight (calculated)
44525.9 Da
IEP (calculated)
9.075
GRAVY (calculated)
-0.442
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRSYSDWN ESSSSLFGSE NLEEELEVVT VRAEEVFSRI PQPQTPSESM KFLSRSWSLS ASEISKALAH KQRQHQSLPT VSHNSPNVFF QDSAANPLMA
101: GKIMNSSGKR KSGKLSKWFH QKQHTNPNTM RNPKRKDKAR VERACVHSAV SIAALAAGLA SVTSNESCGK ESGSMMTLAL ASATELLASH CIEMAEQAGA
201: DRACVAAAVR SSIDIHSPGD LTTLTAAAAT ALRGEAALKA RQLKEARKNA TITPCERSFS DSSWTANCQF RLDEPNLPLE GDLVQCAQNA GAHRLKRVCV
301: YINNKSQVMI KLKSKHIGGT FSKKIKCVVY GVCDEISAWP YSKDNENSED VYFGLKTGQG LLEFKCKSKI QKQRWVAGIQ STLRQVTCLE ADKCTLESLS
401: LSDRMR
101: GKIMNSSGKR KSGKLSKWFH QKQHTNPNTM RNPKRKDKAR VERACVHSAV SIAALAAGLA SVTSNESCGK ESGSMMTLAL ASATELLASH CIEMAEQAGA
201: DRACVAAAVR SSIDIHSPGD LTTLTAAAAT ALRGEAALKA RQLKEARKNA TITPCERSFS DSSWTANCQF RLDEPNLPLE GDLVQCAQNA GAHRLKRVCV
301: YINNKSQVMI KLKSKHIGGT FSKKIKCVVY GVCDEISAWP YSKDNENSED VYFGLKTGQG LLEFKCKSKI QKQRWVAGIQ STLRQVTCLE ADKCTLESLS
401: LSDRMR
001: MEGGFYSDWN DSSSSLFGSE NPEHELEEGN VRSEEIVSQI PQPQTPREPM KFLSRSWSLS ASEISKALAQ KQRQQRDLFS VSQNSPRGFF QDVAADPLMA
101: ENIMNSAGTR RSGRLSKWFH HKQHTNPSTM RIPRKKDKAR VQKAHVHSAV SIAALAAGLA SVTSEESCSK ESCSMMALAL ASATELLASH CIDMAEQAGA
201: DHTCVASTVR SSVDIHSPGD LMTLTAAAAT ALRGEAALKV RQPKESRKNA TITPCERSFS DSHWPGENCQ FRLEEPNLPL EGELVQCARN GLQRNKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEISAWP CRKERENSEE VYFGLKTGQG LLEFKCKSKI QKQRWVAGIQ SNLRLVSCLE AAKCSLESLS
401: LSNRMR
101: ENIMNSAGTR RSGRLSKWFH HKQHTNPSTM RIPRKKDKAR VQKAHVHSAV SIAALAAGLA SVTSEESCSK ESCSMMALAL ASATELLASH CIDMAEQAGA
201: DHTCVASTVR SSVDIHSPGD LMTLTAAAAT ALRGEAALKV RQPKESRKNA TITPCERSFS DSHWPGENCQ FRLEEPNLPL EGELVQCARN GLQRNKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEISAWP CRKERENSEE VYFGLKTGQG LLEFKCKSKI QKQRWVAGIQ SNLRLVSCLE AAKCSLESLS
401: LSNRMR
Arabidopsis Description
At5g47440 [Source:UniProtKB/TrEMBL;Acc:Q9FGL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.