CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04152	Soybean	nucleus	95.18	95.42
KRH28119	Soybean	nucleus	69.8	70.33
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	67.26	67.77
PGSC0003DMT400012161	Potato	nucleus	55.08	55.64
Solyc08g078500.2.1	Tomato	cytosol	54.82	55.38
CDY64500	Canola	cytosol	55.33	54.09
AT4G17350.1	Thale cress	cytosol	55.33	53.83
CDY65120	Canola	cytosol	54.82	53.6
Bra026246.1-P	Field mustard	nucleus	54.57	53.35
CDY09634	Canola	nucleus	55.08	53.06
AT5G47440.1	Thale cress	nucleus	51.52	50.0
GSMUA_Achr8P11040_001	Banana	cytosol	41.88	49.25
Bra024944.1-P	Field mustard	cytosol	50.25	48.89
CDY59298	Canola	nucleus	49.75	48.28
CDX77767	Canola	nucleus	49.24	47.78
GSMUA_Achr11P...	Banana	nucleus	46.45	46.21
TraesCS6B01G275000.1	Wheat	cytosol	42.39	43.26
TraesCS6A01G250400.1	Wheat	cytosol	42.13	43.12
HORVU0Hr1G027000.1	Barley	cytosol	42.39	42.82
HORVU0Hr1G032140.1	Barley	cytosol	42.39	42.82
TraesCS6D01G232200.2	Wheat	cytosol	41.88	42.31
HORVU6Hr1G062990.1	Barley	cytosol	42.39	41.85
Os10t0560000-01	Rice	cytosol	40.1	41.69
TraesCS1B01G234200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	39.34	40.36
TraesCS5A01G540500.1	Wheat	cytosol	37.82	40.16
TraesCS1A01G220700.1	Wheat	cytosol	39.09	40.1
Zm00001d000175_P001	Maize	plastid	40.36	40.05
Zm00001d029886_P001	Maize	vacuole	40.1	39.9
HORVU1Hr1G056150.4	Barley	cytosol, nucleus	38.58	39.69
EER94492	Sorghum	cytosol, endoplasmic reticulum, nucleus	41.37	39.66
TraesCS4D01G363600.1	Wheat	mitochondrion, nucleus	39.85	39.65
TraesCS3A01G147100.2	Wheat	cytosol, endoplasmic reticulum, nucleus	38.07	38.96
Zm00001d051361_P001	Maize	plastid	42.13	38.69
TraesCS5A01G540300.1	Wheat	extracellular	39.85	38.48
KXG31087	Sorghum	nucleus	41.62	38.41
TraesCS4B01G373700.1	Wheat	nucleus	38.83	38.06
TraesCS1D01G222200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	39.09	37.11
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	35.28	33.66
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	34.26	31.91
KRH67258	Soybean	nucleus	29.19	30.1
KRG91356	Soybean	cytosol	36.04	29.83
KRH35470	Soybean	nucleus	35.03	28.99
KRG95576	Soybean	nucleus	34.52	28.04
KRH69115	Soybean	nucleus	34.52	27.98
KRH31661	Soybean	nucleus	34.26	27.95
KRH32056	Soybean	nucleus	33.76	27.65
KRH71381	Soybean	nucleus	32.99	27.03
KRH02952	Soybean	cytosol	22.34	22.92
KRH18946	Soybean	nucleus	22.34	22.74

Protein Annotations

EMBL:ACUP02002832	EnsemblPlants:KRH57434	EnsemblPlantsGene:GLYMA_05G060600	EntrezGene:100819149	InterPro:DUF828	InterPro:PH_pln
PANTHER:PTHR31351	PANTHER:PTHR31351:SF2	PFAM:PF05703	PFAM:PF08458	ProteinID:KRH57434	ProteinID:KRH57434.1
SEG:seg	UniParc:UPI000233A28D	UniProt:I1K0R2	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr5:-:5659119..5663003

Molecular Weight (calculated)

43532.3 Da

IEP (calculated)

9.842

GRAVY (calculated)

-0.378

Length

394 amino acids

Sequence
(BLAST)

001: MDGGYFPPGK IGSWHGLELQ DVQENDELKL VPSLFAIPQP PTPHEPMEFL SRSWSLSAAE ISKALLEKQK HNFHDKNQAT FPEAILATQL VTSKTMPYPY
101: SKKMGTIGKW FHQRHHGNTN ITVKKKDRAR LENARVHSAV SIAGLASALA AVAAAENSSC SQTKLKLALA SATQLLASHC IEMAELAGAD HNHVASTIKS
201: AVDIQTPGDL MTLTAAAATA LRGEAALRAR LPNEAKRNAS ISPYDRVLLP QSHRFFAFEG QSCEHHPPCV GDLSQLTRKG VLRWKHVSVY INKKCQVKIK
301: IKSKHVGGAF SKKNKCVVYG ICDKDGAWPY RKERKTSEEF YFGLKTAQGL LEFKCDSKLH KQKWVDGIGC LLRRVNSIEA TERSLDLLSI NSDT

Best Arabidopsis Sequence Match ( AT4G17350.1 )
(BLAST)

001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT

Arabidopsis Description

At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.