Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 82.32 | 79.32 |
| Zm00001d000175_P001 | Maize | plastid | 78.28 | 78.09 |
| Os10t0560000-01 | Rice | cytosol | 69.44 | 72.56 |
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 66.92 | 69.01 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 66.67 | 68.75 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 66.41 | 68.67 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 66.41 | 68.31 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 66.41 | 63.37 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 48.99 | 57.91 |
| GSMUA_Achr11P... | Banana | nucleus | 53.54 | 53.54 |
| Zm00001d051361_P001 | Maize | plastid | 48.74 | 44.99 |
| PGSC0003DMT400012161 | Potato | nucleus | 40.91 | 41.54 |
| Solyc08g078500.2.1 | Tomato | cytosol | 40.4 | 41.03 |
| CDY65120 | Canola | cytosol | 41.41 | 40.69 |
| AT4G17350.1 | Thale cress | cytosol | 41.41 | 40.49 |
| KRH04152 | Soybean | nucleus | 40.15 | 40.46 |
| Bra026246.1-P | Field mustard | nucleus | 41.16 | 40.45 |
| CDY09634 | Canola | nucleus | 41.67 | 40.34 |
| KRH57434 | Soybean | nucleus | 39.9 | 40.1 |
| CDY64500 | Canola | cytosol | 40.4 | 39.7 |
| KRH28119 | Soybean | nucleus | 38.64 | 39.13 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 37.12 | 37.6 |
| AT5G47440.1 | Thale cress | nucleus | 38.38 | 37.44 |
| CDX77767 | Canola | nucleus | 37.88 | 36.95 |
| Bra024944.1-P | Field mustard | cytosol | 37.12 | 36.3 |
| CDY59298 | Canola | nucleus | 36.87 | 35.96 |
| AT4G16670.1 | Thale cress | cytosol | 36.36 | 33.57 |
| CDY40515 | Canola | cytosol | 37.12 | 33.49 |
| CDY32269 | Canola | cytosol | 31.82 | 33.33 |
| Bra038497.1-P | Field mustard | nucleus | 35.1 | 32.25 |
| Zm00001d039295_P001 | Maize | cytosol | 32.32 | 31.14 |
| Zm00001d030661_P001 | Maize | cytosol | 34.6 | 29.65 |
| Zm00001d033283_P001 | Maize | cytosol | 34.6 | 29.03 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 34.34 | 29.0 |
| Zm00001d003160_P001 | Maize | cytosol | 25.51 | 25.0 |
| Zm00001d025771_P001 | Maize | cytosol | 23.99 | 22.25 |
Protein Annotations
| EnsemblPlants:Zm00001d029886_P001 | EnsemblPlants:Zm00001d029886_T001 | EnsemblPlantsGene:Zm00001d029886 | EntrezGene:103637643 | InterPro:DUF828 | InterPro:PH_pln |
| PANTHER:PTHR31351 | PANTHER:PTHR31351:SF5 | PFAM:PF05703 | PFAM:PF08458 | ProteinID:ONL99770.1 | SEG:seg |
| UniParc:UPI000221C639 | UniProt:A0A1D6K8A5 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1:-:92222078..92224093
Molecular Weight (calculated)
42075.1 Da
IEP (calculated)
10.035
GRAVY (calculated)
-0.320
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKRWKPRDA AAGAFSMALE LVDDEDDAAP PAIPPPQTPL EPMEYLSRSW SVSASEISKI LVAGGNKPSS VAAAACRLPE AAMSIPEQAP VLATSSTVHL
101: PSPQQHRDAR RYSTSGGHHQ SIGRWFQQAH HRETCRAKQS GKEKQRAEKA HVHAMVSVAR VAAAVAAVAG SGDTQTQATK MARAMASATE LLASHCVEAA
201: QHAGARHDQV AAAVQAAVGV GSPGDLVTLT AAAATALRGA ATLKQRVQRE TARSNASVLP YERGSSWSPD IWCKEGDLLK RTRKGGLHRI RVSIYINKRS
301: QVILKLKSKH LGGALSKNNK SVVYGVYSEL PTWAGKGSVE ETCCFGLSTA QGLVELECEG SASKRKWVDD VQSLLREAAL HGHGQVGNGM GLVKLS
101: PSPQQHRDAR RYSTSGGHHQ SIGRWFQQAH HRETCRAKQS GKEKQRAEKA HVHAMVSVAR VAAAVAAVAG SGDTQTQATK MARAMASATE LLASHCVEAA
201: QHAGARHDQV AAAVQAAVGV GSPGDLVTLT AAAATALRGA ATLKQRVQRE TARSNASVLP YERGSSWSPD IWCKEGDLLK RTRKGGLHRI RVSIYINKRS
301: QVILKLKSKH LGGALSKNNK SVVYGVYSEL PTWAGKGSVE ETCCFGLSTA QGLVELECEG SASKRKWVDD VQSLLREAAL HGHGQVGNGM GLVKLS
001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
Arabidopsis Description
At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.