CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	94.37	94.37
KRH04152	Soybean	nucleus	72.12	71.76
KRH57434	Soybean	nucleus	70.33	69.8
Bra026246.1-P	Field mustard	nucleus	57.03	55.34
CDY65120	Canola	cytosol	57.03	55.34
PGSC0003DMT400012161	Potato	nucleus	54.99	55.13
CDY64500	Canola	cytosol	56.78	55.09
Solyc08g078500.2.1	Tomato	cytosol	54.73	54.87
AT4G17350.1	Thale cress	cytosol	56.52	54.57
CDY09634	Canola	nucleus	57.03	54.52
CDY59298	Canola	nucleus	53.45	51.48
Bra024944.1-P	Field mustard	cytosol	52.94	51.11
AT5G47440.1	Thale cress	nucleus	52.69	50.74
GSMUA_Achr8P11040_001	Banana	cytosol	42.97	50.15
CDX77767	Canola	nucleus	51.41	49.51
GSMUA_Achr11P...	Banana	nucleus	46.04	45.45
TraesCS6B01G275000.1	Wheat	cytosol	44.5	45.08
TraesCS6A01G250400.1	Wheat	cytosol	43.73	44.42
HORVU0Hr1G032140.1	Barley	cytosol	43.99	44.1
HORVU0Hr1G027000.1	Barley	cytosol	43.99	44.1
TraesCS6D01G232200.2	Wheat	cytosol	43.73	43.85
HORVU6Hr1G062990.1	Barley	cytosol	43.99	43.11
Os10t0560000-01	Rice	cytosol	41.18	42.48
TraesCS1B01G234200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	40.41	41.15
Zm00001d051361_P001	Maize	plastid	45.01	41.03
TraesCS1A01G220700.1	Wheat	cytosol	40.15	40.89
HORVU1Hr1G056150.4	Barley	cytosol, nucleus	39.9	40.73
KXG31087	Sorghum	nucleus	44.25	40.52
TraesCS4D01G363600.1	Wheat	mitochondrion, nucleus	40.92	40.4
Zm00001d000175_P001	Maize	plastid	40.92	40.3
TraesCS5A01G540500.1	Wheat	cytosol	38.11	40.16
TraesCS3A01G147100.2	Wheat	cytosol, endoplasmic reticulum, nucleus	38.87	39.48
TraesCS5A01G540300.1	Wheat	extracellular	41.18	39.46
EER94492	Sorghum	cytosol, endoplasmic reticulum, nucleus	41.18	39.17
TraesCS4B01G373700.1	Wheat	nucleus	40.15	39.05
Zm00001d029886_P001	Maize	vacuole	39.13	38.64
TraesCS1D01G222200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	40.41	38.07
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	35.29	33.41
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	34.02	31.44
KRG91356	Soybean	cytosol	37.85	31.09
KRH67258	Soybean	nucleus	30.18	30.89
KRH35470	Soybean	nucleus	37.08	30.46
KRH31661	Soybean	nucleus	37.08	30.02
KRH69115	Soybean	nucleus	36.83	29.63
KRH32056	Soybean	nucleus	35.55	28.9
KRG95576	Soybean	nucleus	35.81	28.87
KRH71381	Soybean	nucleus	34.78	28.27
KRH02952	Soybean	cytosol	21.74	22.14
KRH18946	Soybean	nucleus	21.74	21.96

Protein Annotations

EMBL:ACUP02006741	EnsemblPlants:KRH28119	EnsemblPlantsGene:GLYMA_11G034400	EntrezGene:100814851	InterPro:DUF828	InterPro:PH_pln
PANTHER:PTHR31351	PANTHER:PTHR31351:SF2	PFAM:PF05703	PFAM:PF08458	ProteinID:KRH28119	ProteinID:KRH28119.1
SEG:seg	UniParc:UPI000233CB63	UniProt:I1LGR9	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr11:-:2498410..2501474

Molecular Weight (calculated)

43102.5 Da

IEP (calculated)

9.560

GRAVY (calculated)

-0.421

Length

391 amino acids

Sequence
(BLAST)

001: MEGGFFPPWK NGSWQELGSE DVQESEQFKS FPPLAEPPTP REPMEFLSRS WSLSASEISK ALSEKQKQTF LDNKTSDTLP EPISAPQLAG GKMIVSGNCR
101: RMGAIGKWLH QKQYGNTNVS VKKKDRARVE NARVHSALSI AGLASAVAAV AATEDPRGGS RSKLDVALAS ATQLLASYCV EMAEVAGADR ERVASTVRSA
201: VDIQTPGDLM TLTAAAATAL RGEAALTARM PKEAKKNASI SPYDKVIAET QWLRAFDGQV LERYPPCLGD LLQLTEKGAL RWRHVHVYIK KCQVKVKIKS
301: KHVGGAFSKK NKCVVYGVCD KDNAWPYRKE REASEELYFG LKTAQGLLEF KCQNKLHKQK WVDGVEFLLR RVNSVEATEH SLEFLSISTS T

Best Arabidopsis Sequence Match ( AT4G17350.1 )
(BLAST)

001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT

Arabidopsis Description

At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.