CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH01512
KRH45201

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63300.1	KRH01512	AT5G13300.1	19363154
AT3G63300.1	KRH45201	AT5G13300.1	19363154

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71381	Soybean	nucleus	93.76	93.76
KRH67258	Soybean	nucleus	67.98	85.6
KRG95576	Soybean	nucleus	80.25	79.59
VIT_07s0151g00290.t01	Wine grape	nucleus	66.32	66.74
KRG91356	Soybean	cytosol	64.86	65.55
KRH35470	Soybean	nucleus	64.24	64.92
KRH69115	Soybean	nucleus	65.28	64.61
KRH31661	Soybean	nucleus	64.86	64.6
PGSC0003DMT400049811	Potato	plastid	64.45	64.18
Solyc09g065590.2.1	Tomato	plastid	64.86	64.07
GSMUA_Achr5P02990_001	Banana	nucleus	60.08	63.66
GSMUA_Achr7P07730_001	Banana	nucleus	58.63	63.37
GSMUA_AchrUn_...	Banana	nucleus	58.42	61.89
CDX93914	Canola	nucleus	62.99	61.71
Bra040444.1-P	Field mustard	plastid	62.16	61.52
CDY53717	Canola	nucleus	62.58	61.3
GSMUA_Achr4P21170_001	Banana	cytosol	46.57	61.04
AT3G63300.1	Thale cress	plastid	62.58	60.44
TraesCS5A01G377600.1	Wheat	nucleus	55.72	58.39
Zm00001d013705_P001	Maize	cytosol, nucleus, peroxisome	56.76	58.21
TraesCS5D01G387600.1	Wheat	nucleus	55.93	58.1
TraesCS5B01G381200.1	Wheat	nucleus	55.93	57.97
HORVU5Hr1G093460.2	Barley	nucleus	55.93	57.97
Zm00001d033283_P001	Maize	cytosol	56.55	57.63
KXG37970	Sorghum	cytosol	56.34	57.54
Zm00001d030661_P001	Maize	cytosol	54.68	56.93
OQU79534	Sorghum	cytosol, mitochondrion, nucleus	57.59	56.76
TraesCS5B01G060100.2	Wheat	nucleus	55.09	56.5
TraesCS5A01G056700.2	Wheat	nucleus	55.3	56.48
Os12t0604200-00	Rice	nucleus	43.45	56.33
TraesCS5D01G067900.2	Wheat	nucleus	54.89	56.17
Os03t0635800-01	Rice	nucleus	42.62	54.23
GSMUA_Achr4P21160_001	Banana	cytosol	10.81	53.61
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	34.51	40.19
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	33.47	38.06
KRH28119	Soybean	nucleus	28.9	35.55
KRH04152	Soybean	nucleus	28.48	34.86
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	28.27	34.78
KRH57434	Soybean	nucleus	27.65	33.76
KRH02952	Soybean	cytosol	23.08	28.91
KRH18946	Soybean	nucleus	23.08	28.68

Protein Annotations

EMBL:ACUP02006094	EnsemblPlants:KRH32056	EnsemblPlantsGene:GLYMA_10G029300	EntrezGene:100811415	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF8	PFAM:PF05703
PFAM:PF08458	ProteinID:KRH32056	ProteinID:KRH32056.1	SEG:seg	UniParc:UPI000233C7F7	UniProt:I1L870
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:2554201..2558666

Molecular Weight (calculated)

51504.9 Da

IEP (calculated)

9.930

GRAVY (calculated)

-0.309

Length

481 amino acids

Sequence
(BLAST)

001: MEPNLTMKFR RNENLPTNGK HLPESPRVPM EFLSRSWSAS SLEVSKALTP PSSISDIPSK PPNAPSSVSV TNSISEQASE EFSTMCGNQF SFASSATSQL
101: VLDRIMSQSA REEVSPLTSG RLSHSSEPLN GGASLTGTDS PPISPSAEFD DVVKFFRANN SIHPLFNVGR AMSGATTGNA TPSSGPKTVG RWLKDRREKK
201: KEEHRAHNAQ LHAAISVAAV AAAVAAVTAA TAASSAANKD EKMAMAVASA ATLVAAQCVE AAEAMGAERD HLASVVSSAV NVRSHDDITT LTAAAATALR
301: GAATLKARAL KEVWNITAVT PIERGIGIGI CGKGNNSNSS TSDSGEIING ENFLGACSQE FLARGTALLK RTRKGDLHWK IVSVYIHRTG QVMLKMKSRH
401: VAGTITKKKK NVVLDVCTNL PAWPGRHLFD DSEERRYFGL KTEARGIVEF ECRNQREYDT WTHGVSRLLS IVARRQNING V

Best Arabidopsis Sequence Match ( AT3G63300.1 )
(BLAST)

001: MERELRRPNP INSSRRPEIF SSGGSSTQLP ESPRGPMEFL SRSWSVSALE VSRALHTAKS ASATNRPPSS INTPIPEETL NPEKEECPPE NSTSVSSQFS
101: FAASATSQLV LERIMSQSEV SPLTSGRLSH SSGPLNGGGS FTETDSPPIS PSDEFDDVIK YFRTHNTIHP LFSGTGGSRG TTGNGSNTPM AGTGPKTVGR
201: WLKDRKEKKK EETRTQNAQV HAAVSVAAVA SAVAAVAAAT AASSPGKNEQ MARIDMAMAS AAALVAAQCV EAAEIMGADR DHLTSVVSSA VNVKSHDDIV
301: TLTAAAATAL RGAATLKARA LKEVWNIAAV LPAEKGASSA LCGQVDTKHS DSSFSGELPV AGEDFLGVCN QELLAKGTEL LKRTRGGELH WKIVSVYINK
401: AGQAVLKMKS KHVGGTFTKK KKHMVLEVRK DIPAWAGRDL FNGDKHHYFG LKTETKRVIE FECRNQREYE IWTQGVSRLL AIAAEKKQKS SMSKWMAP

Arabidopsis Description

VABVAN3-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.