Factsheet for Solyc09g065590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049811	Potato	plastid	95.89	96.69
KRH67258	Soybean	nucleus	54.83	69.9
VIT_07s0151g00290.t01	Wine grape	nucleus	66.74	67.99
KRH71381	Soybean	nucleus	64.07	64.86
KRH32056	Soybean	nucleus	64.07	64.86
KRG95576	Soybean	nucleus	63.66	63.92
Solyc09g082580.2.1	Tomato	cytosol	60.99	63.87
GSMUA_Achr5P02990_001	Banana	nucleus	58.93	63.22
GSMUA_Achr4P21170_001	Banana	cytosol	47.02	62.4
GSMUA_Achr7P07730_001	Banana	nucleus	56.88	62.25
GSMUA_AchrUn_...	Banana	nucleus	57.91	62.11
GSMUA_Achr4P21160_001	Banana	cytosol	12.12	60.82
Bra040444.1-P	Field mustard	plastid	60.37	60.49
CDX93914	Canola	nucleus	60.78	60.29
CDY53717	Canola	nucleus	60.57	60.08
AT3G63300.1	Thale cress	plastid	61.19	59.84
TraesCS5A01G377600.1	Wheat	nucleus	55.44	58.82
TraesCS5B01G381200.1	Wheat	nucleus	55.44	58.19
TraesCS5D01G387600.1	Wheat	nucleus	55.24	58.1
Zm00001d013705_P001	Maize	cytosol, nucleus, peroxisome	55.85	58.0
HORVU5Hr1G093460.2	Barley	nucleus	55.03	57.76
KXG37970	Sorghum	cytosol	55.44	57.32
Zm00001d033283_P001	Maize	cytosol	55.24	56.99
OQU79534	Sorghum	cytosol, mitochondrion, nucleus	56.67	56.56
TraesCS5A01G056700.2	Wheat	nucleus	53.18	54.99
Zm00001d030661_P001	Maize	cytosol	52.16	54.98
TraesCS5D01G067900.2	Wheat	nucleus	52.98	54.89
TraesCS5B01G060100.2	Wheat	nucleus	52.77	54.8
Os03t0635800-01	Rice	nucleus	41.48	53.44
Os12t0604200-00	Rice	nucleus	40.25	52.83
Solyc08g066860.2.1	Tomato	nucleus	33.47	39.28
Solyc08g078500.2.1	Tomato	cytosol	26.49	33.08
Solyc07g006320.2.1	Tomato	cytosol	25.26	31.54

Protein Annotations

EnsemblPlants:Solyc09g065590.2.1	EnsemblPlantsGene:Solyc09g065590.2	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009719	GO:GO:0009733	GO:GO:0009734	GO:GO:0009987	GO:GO:0010087	GO:GO:0010305
InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF8	PFAM:PF05703	PFAM:PF08458
SEG:seg	UniParc:UPI000276C72E	UniProt:K4CUI5	MapMan:35.1	:	:

Description

VAN3-binding protein [Source:Projected from Arabidopsis thaliana (AT3G63300) UniProtKB/Swiss-Prot;Acc:Q8W4K5]

Coordinates

chr9:+:63747507..63751930

Molecular Weight (calculated)

52875.6 Da

IEP (calculated)

9.439

GRAVY (calculated)

-0.420

Length

487 amino acids

Sequence
(BLAST)

001: MDNRWSEKNL NMNLPESPKA PMEFLSRSWS ASALQVCKAL TTTSSLSSSS SLPTKTNNNN NSVVVTIPEN IISVVEEEDS ANKLAGNTFS FASSATSQLV
101: LDRIMSQSMH NGQEISPLTS GRLSHSSGPL NGSLTEETDS PPVSPSEEFE DVVKYLKANS TLQPLFTNVR TGYTGSAVGL APNTPGGKTV GRWLKERREK
201: KKEESRAQNA QLHAVVSVAG VAASVAAIAA ATASASSTAK DEQMAKTDAA VASAAMLIAA QCVEAAEVMG ADRDHLMSAI SSAVNVRSHG DISTLTAAAA
301: TALRGAATLK ARALKEVWNI AAVIPIEKGI GGGTGRNNDQ NHSNNNNNYC EGLDIEENFL GVCNQELLAR GRELLKRTRN GDLHWKIVSV YLHRSGEVML
401: KMKSKHVGKT ITKKKKNVVT EVYKDVPAWP GRHLFEDGEK RRYFGLKTEI RGVVEFECKN QREYEMWTQG VSRLLSMVAE RKKRFQH

Best Arabidopsis Sequence Match ( AT3G22810.1 )
(BLAST)

001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI

Arabidopsis Description

Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.