Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G63300.1 | KRH01512 | AT5G13300.1 | 19363154 |
| AT3G63300.1 | KRH45201 | AT5G13300.1 | 19363154 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32056 | Soybean | nucleus | 93.76 | 93.76 |
| KRH67258 | Soybean | nucleus | 68.4 | 86.13 |
| KRG95576 | Soybean | nucleus | 80.87 | 80.21 |
| VIT_07s0151g00290.t01 | Wine grape | nucleus | 66.32 | 66.74 |
| KRG91356 | Soybean | cytosol | 64.03 | 64.71 |
| KRH31661 | Soybean | nucleus | 64.66 | 64.39 |
| KRH35470 | Soybean | nucleus | 63.62 | 64.29 |
| Solyc09g065590.2.1 | Tomato | plastid | 64.86 | 64.07 |
| KRH69115 | Soybean | nucleus | 64.66 | 63.99 |
| PGSC0003DMT400049811 | Potato | plastid | 64.24 | 63.98 |
| GSMUA_Achr5P02990_001 | Banana | nucleus | 59.88 | 63.44 |
| GSMUA_Achr7P07730_001 | Banana | nucleus | 58.0 | 62.7 |
| CDX93914 | Canola | nucleus | 63.83 | 62.53 |
| Bra040444.1-P | Field mustard | plastid | 62.99 | 62.35 |
| CDY53717 | Canola | nucleus | 63.41 | 62.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 57.8 | 61.23 |
| AT3G63300.1 | Thale cress | plastid | 63.2 | 61.04 |
| GSMUA_Achr4P21170_001 | Banana | cytosol | 46.36 | 60.76 |
| TraesCS5A01G377600.1 | Wheat | nucleus | 55.09 | 57.73 |
| TraesCS5D01G387600.1 | Wheat | nucleus | 55.3 | 57.45 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 55.93 | 57.36 |
| TraesCS5B01G381200.1 | Wheat | nucleus | 55.3 | 57.33 |
| HORVU5Hr1G093460.2 | Barley | nucleus | 54.89 | 56.9 |
| KXG37970 | Sorghum | cytosol | 55.51 | 56.69 |
| Zm00001d033283_P001 | Maize | cytosol | 55.51 | 56.57 |
| Zm00001d030661_P001 | Maize | cytosol | 54.05 | 56.28 |
| OQU79534 | Sorghum | cytosol, mitochondrion, nucleus | 56.76 | 55.94 |
| TraesCS5B01G060100.2 | Wheat | nucleus | 54.47 | 55.86 |
| TraesCS5A01G056700.2 | Wheat | nucleus | 54.68 | 55.84 |
| Os12t0604200-00 | Rice | nucleus | 43.04 | 55.8 |
| TraesCS5D01G067900.2 | Wheat | nucleus | 54.26 | 55.53 |
| Os03t0635800-01 | Rice | nucleus | 42.2 | 53.7 |
| GSMUA_Achr4P21160_001 | Banana | cytosol | 10.81 | 53.61 |
| KRH62055 | Soybean | cytosol, extracellular, nucleus, plastid | 34.1 | 39.71 |
| KRH52723 | Soybean | cytosol, extracellular, nucleus, plastid | 33.26 | 37.83 |
| KRH28119 | Soybean | nucleus | 28.27 | 34.78 |
| KRH04152 | Soybean | nucleus | 27.86 | 34.1 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 27.65 | 34.02 |
| KRH57434 | Soybean | nucleus | 27.03 | 32.99 |
| KRH02952 | Soybean | cytosol | 23.28 | 29.17 |
| KRH18946 | Soybean | nucleus | 23.28 | 28.94 |
Protein Annotations
| EMBL:ACUP02000894 | EnsemblPlants:KRH71381 | EnsemblPlantsGene:GLYMA_02G144800 | EntrezGene:100782024 | InterPro:DUF828 | InterPro:PH_pln |
| PANTHER:PTHR31351 | PANTHER:PTHR31351:SF8 | PFAM:PF05703 | PFAM:PF08458 | ProteinID:KRH71381 | ProteinID:KRH71381.1 |
| SEG:seg | UniParc:UPI0002336D4A | UniProt:I1JF76 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr2:-:14937297..14941292
Molecular Weight (calculated)
51447.9 Da
IEP (calculated)
8.745
GRAVY (calculated)
-0.285
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHNLTMKCR RNENLLTSGT HLPESPRVPM EFLSRSWSAS SLEVSKALTL PPPPPLSSYI PSKPPNAPSS VTNSISEETS EEFSTMCGNQ FSFASSATSQ
101: LVLDRIMSQS AREEVSPLTS GRLSHSSEPL NGGASLTGTD SPPISPSDEF DDVVKFFRAN NSIHPLFNGG RAMSGATGNA TPCSGPKTVG RWLKDRREKK
201: KEENRTHNAQ LHASISVAAV AAAVAAVTAA TAASSAADKD DKMAMAVASA ATLVAAQCVE AAEAMGAERD HLASVVSSAV NVRSHDDITT LTAAAATALR
301: GAATLKARAL KEVWNITAVT PIESGIGIGI CGKGNNSNSS TSDSGEIING EIFLGACSQE LLARGTALLK RTRKGDLHWK IVSVYLHRTG QVMLKMKSRH
401: VAGTITKKKK NVVLDVCINL PAWPGRHLFD DSEERRYFGL KTEARGIVEF ECRNQREYDT WTQGVSRLLS MVASRQNING V
101: LVLDRIMSQS AREEVSPLTS GRLSHSSEPL NGGASLTGTD SPPISPSDEF DDVVKFFRAN NSIHPLFNGG RAMSGATGNA TPCSGPKTVG RWLKDRREKK
201: KEENRTHNAQ LHASISVAAV AAAVAAVTAA TAASSAADKD DKMAMAVASA ATLVAAQCVE AAEAMGAERD HLASVVSSAV NVRSHDDITT LTAAAATALR
301: GAATLKARAL KEVWNITAVT PIESGIGIGI CGKGNNSNSS TSDSGEIING EIFLGACSQE LLARGTALLK RTRKGDLHWK IVSVYLHRTG QVMLKMKSRH
401: VAGTITKKKK NVVLDVCINL PAWPGRHLFD DSEERRYFGL KTEARGIVEF ECRNQREYDT WTQGVSRLLS MVASRQNING V
001: MERELRRPNP INSSRRPEIF SSGGSSTQLP ESPRGPMEFL SRSWSVSALE VSRALHTAKS ASATNRPPSS INTPIPEETL NPEKEECPPE NSTSVSSQFS
101: FAASATSQLV LERIMSQSEV SPLTSGRLSH SSGPLNGGGS FTETDSPPIS PSDEFDDVIK YFRTHNTIHP LFSGTGGSRG TTGNGSNTPM AGTGPKTVGR
201: WLKDRKEKKK EETRTQNAQV HAAVSVAAVA SAVAAVAAAT AASSPGKNEQ MARIDMAMAS AAALVAAQCV EAAEIMGADR DHLTSVVSSA VNVKSHDDIV
301: TLTAAAATAL RGAATLKARA LKEVWNIAAV LPAEKGASSA LCGQVDTKHS DSSFSGELPV AGEDFLGVCN QELLAKGTEL LKRTRGGELH WKIVSVYINK
401: AGQAVLKMKS KHVGGTFTKK KKHMVLEVRK DIPAWAGRDL FNGDKHHYFG LKTETKRVIE FECRNQREYE IWTQGVSRLL AIAAEKKQKS SMSKWMAP
101: FAASATSQLV LERIMSQSEV SPLTSGRLSH SSGPLNGGGS FTETDSPPIS PSDEFDDVIK YFRTHNTIHP LFSGTGGSRG TTGNGSNTPM AGTGPKTVGR
201: WLKDRKEKKK EETRTQNAQV HAAVSVAAVA SAVAAVAAAT AASSPGKNEQ MARIDMAMAS AAALVAAQCV EAAEIMGADR DHLTSVVSSA VNVKSHDDIV
301: TLTAAAATAL RGAATLKARA LKEVWNIAAV LPAEKGASSA LCGQVDTKHS DSSFSGELPV AGEDFLGVCN QELLAKGTEL LKRTRGGELH WKIVSVYINK
401: AGQAVLKMKS KHVGGTFTKK KKHMVLEVRK DIPAWAGRDL FNGDKHHYFG LKTETKRVIE FECRNQREYE IWTQGVSRLL AIAAEKKQKS SMSKWMAP
Arabidopsis Description
VABVAN3-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.