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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92945
KRG95576
KRH01512
KRH27831
KRH32056
KRH33850
KRH41321
KRH45201
KRH60047
KRH67258
KRH71381
KRH77654

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13300.1 KRG95576 AT3G63300.1 19363154
AT5G13300.1 KRH32056 AT3G63300.1 19363154
AT5G13300.1 KRH67258 AT3G63300.1 19363154
AT5G13300.1 KRH71381 AT3G63300.1 19363154
AT5G13300.1 KRH01512 AT5G13300.1 15743878
AT5G13300.1 KRH45201 AT5G13300.1 15743878
AT5G13300.1 KRG92945 AT5G26980.1 15743878
AT5G13300.1 KRH33850 AT5G26980.1 15743878
AT5G13300.1 KRH27831 AT5G42080.1 15923323
AT5G13300.1 KRH41321 AT5G42080.1 15923323
AT5G13300.1 KRH60047 AT5G42080.1 15923323
AT5G13300.1 KRH77654 AT5G42080.1 15923323
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH45201 Soybean cytosol 95.47 97.33
VIT_01s0150g00030.t01 Wine grape cytosol 83.55 84.25
PGSC0003DMT400005756 Potato cytosol 77.47 79.56
Bra006193.1-P Field mustard cytosol 75.57 77.98
AT5G13300.1 Thale cress cytosol 76.4 77.51
CDY09784 Canola cytosol 73.54 77.32
CDX78515 Canola cytosol 75.8 76.53
CDX69650 Canola cytosol 75.21 76.39
Bra008838.1-P Field mustard cytosol 74.97 76.15
Zm00001d049872_P001 Maize cytosol 47.56 72.68
GSMUA_Achr11P... Banana cytosol 70.08 72.06
Solyc12g042180.1.1 Tomato cytosol 18.83 70.54
TraesCS5A01G293000.1 Wheat cytosol 69.61 70.28
GSMUA_Achr4P00060_001 Banana cytosol 70.08 70.25
TraesCS5B01G292200.1 Wheat cytosol 69.49 69.9
HORVU5Hr1G077570.15 Barley cytosol 69.61 69.77
Os09t0510700-01 Rice cytosol 69.37 69.62
TraesCS5D01G300300.2 Wheat cytosol 69.49 69.4
Zm00001d021087_P003 Maize cytosol 68.89 69.06
EER99172 Sorghum cytosol 68.77 69.02
OQU80812 Sorghum cytosol 65.2 66.38
TraesCS7A01G263800.2 Wheat cytosol 64.36 65.61
GSMUA_Achr7P22530_001 Banana endoplasmic reticulum 57.81 65.54
Zm00001d031667_P006 Maize cytosol 64.12 65.37
HORVU7Hr1G055220.21 Barley cytosol 64.24 64.86
Os08t0537600-01 Rice plasma membrane 64.12 64.74
TraesCS7D01G264700.1 Wheat endoplasmic reticulum 64.48 63.87
TraesCS7B01G161800.1 Wheat endoplasmic reticulum 64.48 63.87
Solyc12g042170.1.1 Tomato cytosol 40.17 62.18
Zm00001d009353_P001 Maize cytosol 8.82 61.16
KRH63858 Soybean cytosol 56.38 60.25
KRH59741 Soybean cytosol 57.09 59.88
Zm00001d015981_P001 Maize peroxisome 10.25 56.21
KRH54108 Soybean cytosol 47.8 54.34
CDY53619 Canola cytosol 20.74 51.63
Zm00001d015278_P001 Maize mitochondrion 20.02 50.0
Zm00001d004245_P003 Maize cytosol 11.32 49.48
KRH24228 Soybean cytosol 43.98 47.55
KRH29237 Soybean cytosol 43.86 47.42
Zm00001d049871_P001 Maize cytosol 10.73 47.12
Zm00001d023982_P001 Maize cytosol 15.49 33.42
KRH15700 Soybean cytosol 7.51 32.47
KRH38902 Soybean cytosol 7.87 27.16
KRH09434 Soybean cytosol 7.75 26.64
KRH41906 Soybean cytosol 8.46 23.75
KRH22157 Soybean cytosol 10.61 18.5
KRH27179 Soybean cytosol 10.61 18.39
KRH26038 Soybean cytosol 10.37 17.4
KRH55419 Soybean cytosol 9.89 16.09
KRH45437 Soybean endoplasmic reticulum, mitochondrion 7.27 15.14
KRH75607 Soybean cytosol 7.27 15.14
KRH19707 Soybean cytosol 7.99 13.93
KRH32302 Soybean mitochondrion 7.75 13.57
KRH67539 Soybean mitochondrion 7.51 12.96
KRG95812 Soybean endoplasmic reticulum 7.51 12.88
KRH30767 Soybean nucleus 3.58 12.35
CDY08879 Canola cytosol 1.79 4.76
Protein Annotations
Gene3D:1.20.1270.60Gene3D:1.25.40.20EntrezGene:100789134MapMan:22.3.4.1Gene3D:3.30.40.160UniProt:A0A0R0FEV9
EMBL:ACUP02011518InterPro:AGD1/2/3/4_BAR_plantInterPro:AH/BAR_dom_sfInterPro:ARFGAP/RecOInterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sfInterPro:ArfGAP_domInterPro:ArfGAP_dom_sfInterPro:BAR_domncoils:CoilEnsemblPlantsGene:GLYMA_18G282000
GO:GO:0003674GO:GO:0005096GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0030234GO:GO:0043547GO:GO:0046872
InterPro:IPR001164InterPro:IPR001849InterPro:IPR002110InterPro:IPR004148InterPro:IPR020683InterPro:IPR027267
InterPro:IPR036770InterPro:IPR038508EnsemblPlants:KRH01512ProteinID:KRH01512ProteinID:KRH01512.1PFAM:PF00169
PFAM:PF01412PFAM:PF13637PFAM:PF16746InterPro:PH_domainPRINTS:PR00405PFscan:PS50003
PFscan:PS50088PFscan:PS50115PFscan:PS50297PANTHER:PTHR23180PANTHER:PTHR23180:SF374SMART:SM00105
SMART:SM00233SMART:SM00248SMART:SM00721SUPFAM:SSF103657SUPFAM:SSF48403SUPFAM:SSF50729
SUPFAM:SSF57863UniParc:UPI0006EDC365SEG:seg:::
Description
hypothetical protein
Coordinates
chr18:+:56285699..56294543
Molecular Weight (calculated)
93816.7 Da
IEP (calculated)
7.170
GRAVY (calculated)
-0.478
Length
839 amino acids
Sequence
(BLAST)
001: MVCTTATHGE GRFQNLEENL SELIHSLLVY EIQCMEESAE SLRERSLKFY KGCRKYTEGL GEAYDGDIAF ASALETFGGG HNDPISVAFG GPVMTKFTIA
101: LREIGTYKEV LRSQVEHMLN DRLLQFVNID LQEVKEARKR FDKASLIYDQ TRERFLSLRK GTKTGVATAL EEELHSARST FEQARFNLVT ALSNVEAKKR
201: FEFLEAVSGT MDAHLRYFKQ GYELLHQMEP YINQVLTYAQ QSRERSNYEQ AALNERMQEY KRQIDRESRW ASNGSNGSPN GDGIQAIGRS SHKMIEAVMQ
301: SAAKGKVQTI RQGYLSKRSS NLRGDWKRRF FVLDSRGMLY YYRKQCSKSS GSSSQHSGQR NSSELGSGLL SRWLSSHHHG GVHDEKSVAH HTVNLLTSTI
401: KVDADQSDLR FCFRIISPTK NYTLQAESAL DQMDWIEKIT GVIASLLSSQ IPDRMLPASP MGSGHHRSTS ESSSFESSDF DHSAVEECAA DRSFTSAYLE
501: RPSRSLQQQR SCTKSEKPID VLRRVCGNDK CADCGAPEPD WASLNLGVLV CIECSGVHRN LGVHISKVRS LTLDVKVWEP SVISLFQSLG NTFANSVWEE
601: LLQSRSAFQV DLVPTGLSKS DKPMMFFITK PCQSDSLSVK EKFIHAKYAE KLFVRKPKDN QYRLLVAQQI WEAVHANDKK AVYRYIVNSD VDVNAVYEPT
701: CSSSLTLAKV MLLQEQTSHD HSSTLAGNTL DWSSTKEGQV MDNLDGCTLL HLACETADIG MVELLLQYGA NVNATDSRGQ TPLHRCILKG RSTFARLLLS
801: RGADPRAVDE QGRTPIELAA ESNAGGDREV HAPSTDSNG
Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)
001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC
Arabidopsis Description
AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.