CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63858	Soybean	cytosol	81.71	76.82
KRH59741	Soybean	cytosol	60.3	55.62
Zm00001d049872_P001	Maize	cytosol	38.08	51.18
KRH45201	Soybean	cytosol	54.2	48.6
KRH01512	Soybean	cytosol	54.34	47.8
GSMUA_Achr11P...	Banana	cytosol	52.17	47.18
TraesCS7A01G263800.2	Wheat	cytosol	52.03	46.66
HORVU7Hr1G055220.21	Barley	cytosol	52.3	46.45
Os08t0537600-01	Rice	plasma membrane	52.17	46.33
OQU80812	Sorghum	cytosol	51.49	46.12
Zm00001d031667_P006	Maize	cytosol	50.95	45.69
TraesCS5A01G293000.1	Wheat	cytosol	51.35	45.61
TraesCS5B01G292200.1	Wheat	cytosol	51.49	45.56
GSMUA_Achr4P00060_001	Banana	cytosol	51.63	45.52
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	52.03	45.34
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	52.03	45.34
HORVU5Hr1G077570.15	Barley	cytosol	51.22	45.16
TraesCS5D01G300300.2	Wheat	cytosol	51.22	45.0
Os09t0510700-01	Rice	cytosol	50.95	44.98
Zm00001d021087_P003	Maize	cytosol	50.68	44.68
EER99172	Sorghum	cytosol	49.86	44.02
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	41.73	41.62
Zm00001d009353_P001	Maize	cytosol	6.64	40.5
Zm00001d015981_P001	Maize	peroxisome	8.27	39.87
Zm00001d015278_P001	Maize	mitochondrion	16.67	36.61
Zm00001d004245_P003	Maize	cytosol	9.49	36.46
KRH29237	Soybean	cytosol	37.8	35.95
KRH24228	Soybean	cytosol	37.67	35.82
Zm00001d049871_P001	Maize	cytosol	7.86	30.37
Zm00001d023982_P001	Maize	cytosol	13.28	25.19
KRH15700	Soybean	cytosol	6.23	23.71
KRH38902	Soybean	cytosol	6.5	19.75
KRH09434	Soybean	cytosol	6.5	19.67
KRH41906	Soybean	cytosol	7.05	17.39
KRH26038	Soybean	cytosol	10.3	15.2
KRH22157	Soybean	cytosol	9.76	14.97
KRH27179	Soybean	cytosol	9.76	14.88
KRH55419	Soybean	cytosol	10.03	14.34
KRH75607	Soybean	cytosol	6.37	11.66
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	6.37	11.66
KRH19707	Soybean	cytosol	7.45	11.43
KRH32302	Soybean	mitochondrion	7.18	11.06
KRG95812	Soybean	endoplasmic reticulum	7.32	11.04
KRH67539	Soybean	mitochondrion	7.18	10.91
KRH30767	Soybean	nucleus	2.98	9.05

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	Gene3D:2.30.29.30	MapMan:22.3.4.1	Gene3D:3.30.40.160	EMBL:ACUP02003492
InterPro:AGD1/2/3/4_BAR_plant	InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:GLYMA_06G164700	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164
InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR011993	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770
InterPro:IPR038508	UniProt:K7KVG3	EnsemblPlants:KRH54108	ProteinID:KRH54108	ProteinID:KRH54108.1	PFAM:PF00169
PFAM:PF01412	PFAM:PF13637	PFAM:PF16746	InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00405
PFscan:PS50003	PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF374
SMART:SM00105	SMART:SM00233	SMART:SM00248	SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729
SUPFAM:SSF57863	UniParc:UPI000296BD08	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:13631699..13639096

Molecular Weight (calculated)

83581.6 Da

IEP (calculated)

7.734

GRAVY (calculated)

-0.422

Length

738 amino acids

Sequence
(BLAST)

001: MQLQCMEESS ESLRSRCFKE GLGEAYDGDI SIASALENFG GGHNDPLFVT LGGPVVTKFS IALREISTYK ELLRSQAEHM LNDRLLNMLN VDILDVKEAR
101: RRFEKASLVH DQGREKFMSL RKSTRMDIAT VVEEDLHNAR TSLEEARFNL VSALHNVEAK KRFEFLEAVT GVMDAHLRYY RQVYDDTGYQ LLHEMEPFII
201: EVLAYTQKAR ESYNEKQISL CERMLEYKKH VNHESMLSLN GPYDSPCRDG QVQPFSRISN KVADAITESA ENGKVQIIRQ GFLSKRSTNL RGDWKRRYFV
301: LDSRGMLYYF RKPWSGLHSG NQSSLHRNCA TDNSAGIFSR LLSSHYHGFI PDEKFVARHT VNLLTSTIKI DAEHYTLQAE NALDQMDWME KITGVIASLL
401: SAQTLRQTCT MIIVWQNFSH QYKYNIRRLS LKHLAFLIKL SGDSIKNEKP IEVLRKVGGN EKCADCGKPD PDWASLNLGI LICIECSGVH RNLGVHISKS
501: LGNLFANSVW KELLHSTSTS QTDDTPDGSF KTHKKLFHAR KPAHDDPLSL KERFIHAKKA VYRHVVKSDV DVIAISGEAG FSSNMPSSSN PNTSCKTKTR
601: QEEDIQDGSS VLHLVCLTSD SAMVELLLQY GADVNAIDSR GRTPLHYSTM RGESAITKVL YYKLCHYPSH EEYCISILYY LTCLANLKFA NYFRGANPLA
701: GDKEGNTPFK LAPEPDTVVK DTLALNQQTT CPQNLLEK

Best Arabidopsis Sequence Match ( AT1G10870.1 )
(BLAST)

001: MATFINLEDS PMFQKQVCSL EGTADELKDR CQKLYKGVKK FMGTLGEASK GESAFAACLE EFGGGPDDPI SLSIGGPVIS KFINALRELA SYKEFLCSQV
101: EHVLLERLMN FISVDLQEAK ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDAHL
201: RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS
301: SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITKAI GTLLNSHFLQ QSPVRYLDKD NSSSAPANAV VSGDQIRHND SRQNIGDDVS TILRGLPGNN ACAECNAPEP DWASLNLGVL
501: LCIQCSGVHR NLGVHISKVR SLSLDVKVWE PTILDLFRNL GNVYCNSLWE GLLHLDDDCE DGSALSHASV SKPCPEDSFS VKEKYILGKY LEKALVIKDE
601: SEANLSAASR IWEAVQSRNI REIYRLIVTT GDVNIINTKF DDITDIDAYH HIDAAEKAVK KRHDPTVCQR IKESNEPRSC LQGCSLLHVA CHIGDSVLLE
701: LLLQFGADLN IRDYHGRTPL HHCISSGNHK FAKILLRRGA RPSIEDDGGL SVLERAMEMG AITDEELFLL LAECA

Arabidopsis Description

AGD4ARF-GAP domain 4 [Source:TAIR;Acc:AT1G10870]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.